| ProteomeXchange provides globally coordinated proteomics data submission and dissemination JA Vizcaíno, EW Deutsch, R Wang, A Csordas, F Reisinger, D Ríos, ... Nature biotechnology 32 (3), 223-226, 2014 | 2772 | 2014 |
| Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations FF Gonzalez-Galarza, S Christmas, D Middleton, AR Jones Nucleic acids research 39 (suppl_1), D913-D919, 2010 | 873 | 2010 |
| Allele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations FF González-Galarza, LYC Takeshita, EJM Santos, F Kempson, ... Nucleic acids research 43 (D1), D784-D788, 2015 | 843 | 2015 |
| The minimum information about a proteomics experiment (MIAPE) CF Taylor, NW Paton, KS Lilley, PA Binz, RK Julian Jr, AR Jones, W Zhu, ... Nature biotechnology 25 (8), 887-893, 2007 | 825 | 2007 |
| Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools FF Gonzalez-Galarza, A McCabe, EJM Santos, J Jones, L Takeshita, ... Nucleic acids research 48 (D1), D783-D788, 2020 | 623 | 2020 |
| VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center B Amos, C Aurrecoechea, M Barba, A Barreto, EY Basenko, R Belnap, ... Nucleic acids research 50 (D1), D898-D911, 2022 | 368 | 2022 |
| The mzIdentML data standard for mass spectrometry-based proteomics results AR Jones, M Eisenacher, G Mayer, O Kohlbacher, J Siepen, SJ Hubbard, ... Molecular & Cellular Proteomics 11 (7), M111. 014381-1-M111. 014381-10, 2012 | 230 | 2012 |
| Strong anion exchange‐mediated phosphoproteomics reveals extensive human non‐canonical phosphorylation G Hardman, S Perkins, PJ Brownridge, CJ Clarke, DP Byrne, ... The EMBO journal 38 (21), e100847, 2019 | 166 | 2019 |
| The proteome of Toxoplasma gondii: integration with the genome provides novel insights into gene expression and annotation D Xia, SJ Sanderson, AR Jones, JH Prieto, JR Yates, E Bromley, ... Genome biology 9, 1-18, 2008 | 154 | 2008 |
| The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience J Griss, AR Jones, T Sachsenberg, M Walzer, L Gatto, J Hartler, ... Molecular & Cellular Proteomics 13 (10), 2765-2775, 2014 | 153 | 2014 |
| Modulation of the Host Cell Proteome by the Intracellular Apicomplexan Parasite Toxoplasma gondii MM Nelson, AR Jones, JC Carmen, AP Sinai, R Burchmore, JM Wastling Infection and immunity 76 (2), 828-844, 2008 | 140 | 2008 |
| The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics AR Jones, M Miller, R Aebersold, R Apweiler, CA Ball, A Brazma, ... Nature Biotechnology 25 (10), 1127-1133, 2007 | 132 | 2007 |
| Improving sensitivity in proteome studies by analysis of false discovery rates for multiple search engines AR Jones, JA Siepen, SJ Hubbard, NW Paton Proteomics 9 (5), 1220-1229, 2009 | 118 | 2009 |
| Allele frequencies net database: improvements for storage of individual genotypes and analysis of existing data EJM Dos Santos, A McCabe, FF Gonzalez-Galarza, AR Jones, ... Human immunology 77 (3), 238-248, 2016 | 110 | 2016 |
| The HUPO proteomics standards initiative-mass spectrometry controlled vocabulary G Mayer, L Montecchi-Palazzi, D Ovelleiro, AR Jones, PA Binz, ... Database 2013, bat009, 2013 | 105 | 2013 |
| Characterising proteolysis during SARS-CoV-2 infection identifies viral cleavage sites and cellular targets with therapeutic potential B Meyer, J Chiaravalli, S Gellenoncourt, P Brownridge, DP Bryne, LA Daly, ... Nature Communications 12 (1), 5553, 2021 | 104 | 2021 |
| Proteomics standards initiative: fifteen years of progress and future work EW Deutsch, S Orchard, PA Binz, W Bittremieux, M Eisenacher, ... Journal of proteome research 16 (12), 4288-4298, 2017 | 97 | 2017 |
| In silicoanalysis of HLA associations with drug-induced liver injury: use of a HLA-genotyped DNA archive from healthy volunteers A Alfirevic, F Gonzalez-Galarza, C Bell, K Martinsson, V Platt, G Bretland, ... Genome medicine 4, 1-14, 2012 | 85 | 2012 |
| Development of data representation standards by the human proteome organization proteomics standards initiative EW Deutsch, JP Albar, PA Binz, M Eisenacher, AR Jones, G Mayer, ... Journal of the American medical informatics association 22 (3), 495-506, 2015 | 75 | 2015 |
| The mzquantml data standard for mass spectrometry–based quantitative studies in proteomics M Walzer, D Qi, G Mayer, J Uszkoreit, M Eisenacher, T Sachsenberg, ... Molecular & cellular proteomics 12 (8), 2332-2340, 2013 | 74 | 2013 |
