| A new approach to sequence comparison: normalized sequence alignment AN Arslan, Ö Eğecioğlu, PA Pevzner Proceedings of the fifth annual international conference on Computational …, 2001 | 147 | 2001 |
| Efficient string matching with wildcards and length constraints G Chen, X Wu, X Zhu, AN Arslan, Y He Knowledge and information systems 10, 399-419, 2006 | 100 | 2006 |
| Algorithms for the constrained longest common subsequence problems AN Arslan, Ö Eğecioğlu International Journal of Foundations of Computer Science 16 (06), 1099-1109, 2005 | 91 | 2005 |
| PMBC: Pattern mining from biological sequences with wildcard constraints X Wu, X Zhu, Y He, AN Arslan Computers in biology and medicine 43 (5), 481-492, 2013 | 62 | 2013 |
| Efficient algorithms for normalized edit distance AN Arslan, O Egecioglu Journal of Discrete Algorithms 1 (1), 3-20, 2000 | 38 | 2000 |
| Multiple sequence alignment containing a sequence of regular expressions AN Arslan 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2005 | 32 | 2005 |
| An efficient uniform-cost normalized edit distance algorithm AN Arslan, O Egecioglu 6th International Symposium on String Processing and Information Retrieval …, 1999 | 30 | 1999 |
| Regular expression constrained sequence alignment AN Arslan Journal of Discrete Algorithms 5 (4), 647-661, 2007 | 28 | 2007 |
| Threat assessment using visual hierarchy and conceptual firearms ontology AN Arslan, CF Hempelmann, S Attardo, GP Blount, NM Sirakov Optical engineering 54 (5), 053109-053109, 2015 | 19 | 2015 |
| Mining frequent patterns with wildcards from biological sequences Y He, X Wu, X Zhu, AN Arslan 2007 IEEE International Conference on Information Reuse and Integration, 329-334, 2007 | 18 | 2007 |
| A fast algorithm for the constrained multiple sequence alignment problem D He, AN Arslan, ACH Ling Acta Cybernetica 17 (4), 701-717, 2006 | 18 | 2006 |
| A space-efficient algorithm for the constrained pairwise sequence alignment problem D He, AN Arslan Genome Informatics 16 (2), 237-246, 2005 | 17 | 2005 |
| Dynamic programming based approximation algorithms for sequence alignment with constraints AN Arslan, Ö Eğecioğlu INFORMS Journal on Computing 16 (4), 441-458, 2004 | 17 | 2004 |
| A parallel algorithm for the constrained multiple sequence alignment problem D He, AN Arslan Fifth IEEE Symposium on Bioinformatics and Bioengineering (BIBE'05), 258-262, 2005 | 12 | 2005 |
| Dictionary look-up within small edit distance AN Arslan, Ö Eğecioğlu International Computing and Combinatorics Conference, 127-136, 2002 | 12 | 2002 |
| Weapon ontology annotation using boundary describing sequences AN Arslan, NM Sirakov, S Attardo 2012 IEEE Southwest Symposium on Image Analysis and Interpretation, 101-104, 2012 | 11 | 2012 |
| An improved algorithm for the regular expression constrained multiple sequence alignment problem AN Arslan, D He Sixth IEEE Symposium on BioInformatics and BioEngineering (BIBE'06), 121-126, 2006 | 10 | 2006 |
| Regular expression constrained sequence alignment AN Arslan Combinatorial Pattern Matching: 16th Annual Symposium, CPM 2005, Jeju Island …, 2005 | 10 | 2005 |
| Phylogeny by top down clustering using a given multiple alignment AN Arslan, P Bizargity 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering …, 2007 | 9 | 2007 |
| From shape to threat: exploiting the convergence between visual and conceptual organization for weapon identification and threat assessment AN Arslan, CF Hempelmann, C Di Ferrante, S Attardo, NM Sirakov Automatic Target Recognition XXIII 8744, 208-222, 2013 | 8 | 2013 |