| Geometric characteristics of hydrogen bonds involving sulfur atoms in proteins P Zhou, F Tian, F Lv, Z Shang Proteins: Structure, Function, and Bioinformatics 76 (1), 151-163, 2009 | 297 | 2009 |
| Fluorine Bonding How Does It Work In Protein− Ligand Interactions? P Zhou, J Zou, F Tian, Z Shang Journal of chemical information and modeling 49 (10), 2344-2355, 2009 | 279 | 2009 |
| T-scale as a novel vector of topological descriptors for amino acids and its application in QSARs of peptides F Tian, P Zhou, Z Li Journal of molecular structure 830 (1-3), 106-115, 2007 | 176 | 2007 |
| Specific noncovalent interactions at protein-ligand interface: implications for rational drug design P Zhou, J Huang, F Tian Current medicinal chemistry 19 (2), 226-238, 2012 | 154 | 2012 |
| Targeting Self-Binding Peptides as a Novel Strategy To Regulate Protein Activity and Function: A Case Study on the Proto-oncogene Tyrosine Protein Kinase c-Src Z Bai, S Hou, S Zhang, Z Li, P Zhou Journal of Chemical Information and Modeling 57 (4), 835-845, 2017 | 133 | 2017 |
| Self-binding peptides: folding or binding? C Yang, S Zhang, P He, C Wang, J Huang, P Zhou Journal of Chemical Information and Modeling 55 (2), 329-342, 2015 | 132 | 2015 |
| Computational peptidology: a new and promising approach to therapeutic peptide design P Zhou, C Wang, Y Ren, C Yang, F Tian Current Medicinal Chemistry 20 (15), 1985-1996, 2013 | 124 | 2013 |
| Indirect readout in protein-peptide recognition: a different story from classical biomolecular recognition H Yu, P Zhou, M Deng, Z Shang Journal of Chemical Information and Modeling 54 (7), 2022-2032, 2014 | 121 | 2014 |
| What are the ideal properties for functional food peptides with antihypertensive effect? A computational peptidology approach P Zhou, C Yang, Y Ren, C Wang, F Tian Food chemistry 141 (3), 2967-2973, 2013 | 120 | 2013 |
| Structural modeling of HLA-B* 1502/peptide/carbamazepine/T-cell receptor complex architecture: implication for the molecular mechanism of carbamazepine-induced Stevens-Johnson … P Zhou, S Zhang, Y Wang, C Yang, J Huang Journal of Biomolecular Structure and Dynamics 34 (8), 1806-1817, 2016 | 117 | 2016 |
| A two-step binding mechanism for the self-binding peptide recognition of target domains C Yang, S Zhang, Z Bai, S Hou, D Wu, J Huang, P Zhou Molecular BioSystems 12 (4), 1201-1213, 2016 | 116 | 2016 |
| In silico quantitative prediction of peptides binding affinity to human MHC molecule: an intuitive quantitative structure–activity relationship approach F Tian, L Yang, F Lv, Q Yang, P Zhou Amino Acids 36, 535-554, 2009 | 112 | 2009 |
| Is protein context responsible for peptide-mediated interactions? P Zhou, Q Miao, F Yan, Z Li, Q Jiang, L Wen, Y Meng Molecular Omics 15 (4), 280-295, 2019 | 107 | 2019 |
| Biomacromolecular quantitative structure–activity relationship (BioQSAR): a proof-of-concept study on the modeling, prediction and interpretation of protein–protein binding … P Zhou, C Wang, F Tian, Y Ren, C Yang, J Huang Journal of computer-aided molecular design 27, 67-78, 2013 | 99 | 2013 |
| Disrupting the intramolecular interaction between proto-oncogene c-Src SH3 domain and its self-binding peptide PPII with rationally designed peptide ligands P Zhou, S Hou, Z Bai, Z Li, H Wang, Z Chen, Y Meng Artificial Cells, Nanomedicine, and Biotechnology 46 (6), 1122-1131, 2018 | 95 | 2018 |
| Machine learning in quantitative protein–peptide affinity prediction: implications for therapeutic peptide design Z Li, Q Miao, F Yan, Y Meng, P Zhou Current drug metabolism 20 (3), 170-176, 2019 | 94 | 2019 |
| BDB: biopanning data bank B He, G Chai, Y Duan, Z Yan, L Qiu, H Zhang, Z Liu, Q He, K Han, B Ru, ... Nucleic acids research 44 (D1), D1127-D1132, 2016 | 92 | 2016 |
| Characterization of PDZ domain–peptide interactions using an integrated protocol of QM/MM, PB/SA, and CFEA analyses F Tian, Y Lv, P Zhou, L Yang Journal of computer-aided molecular design 25, 947-958, 2011 | 87 | 2011 |
| Structural and energetic insights into the intermolecular interaction among human leukocyte antigens, clinical hypersensitive drugs and antigenic peptides C Yang, C Wang, S Zhang, J Huang, P Zhou Molecular Simulation 41 (9), 741-751, 2015 | 84 | 2015 |
| Systematic comparison and comprehensive evaluation of 80 amino acid descriptors in peptide QSAR modeling P Zhou, Q Liu, T Wu, Q Miao, S Shang, H Wang, Z Chen, S Wang, ... Journal of chemical information and modeling 61 (4), 1718-1731, 2021 | 83 | 2021 |
