Machine learning of coarse-grained molecular dynamics force fields J Wang, S Olsson, C Wehmeyer, A Pérez, NE Charron, G De Fabritiis, ... ACS central science 5 (5), 755-767, 2019 | 498 | 2019 |
TorchMD: A deep learning framework for molecular simulations S Doerr, M Majewski, A Pérez, A Kramer, C Clementi, F Noe, T Giorgino, ... Journal of chemical theory and computation 17 (4), 2355-2363, 2021 | 205 | 2021 |
Coarse graining molecular dynamics with graph neural networks BE Husic, NE Charron, D Lemm, J Wang, A Pérez, M Majewski, A Krämer, ... The Journal of chemical physics 153 (19), 2020 | 181 | 2020 |
Machine learning coarse-grained potentials of protein thermodynamics M Majewski, A Pérez, P Thölke, S Doerr, NE Charron, T Giorgino, ... Nature communications 14 (1), 5739, 2023 | 72 | 2023 |
Simulations meet machine learning in structural biology A Pérez, G Martínez-Rosell, G De Fabritiis Current opinion in structural biology 49, 139-144, 2018 | 54 | 2018 |
Nutrición y metabolismo en trastornos de la conducta alimentaria A Mijan, B De Mateo, AM Pérez Barcelona: Glosa 2, 2004 | 38 | 2004 |
AdaptiveBandit: a multi-armed bandit framework for adaptive sampling in molecular simulations A Pérez, P Herrera-Nieto, S Doerr, G De Fabritiis Journal of chemical theory and computation 16 (7), 4685-4693, 2020 | 37 | 2020 |
Characterization of partially ordered states in the intrinsically disordered N-terminal domain of p53 using millisecond molecular dynamics simulations P Herrera-Nieto, A Pérez, G De Fabritiis Scientific reports 10 (1), 12402, 2020 | 26 | 2020 |
Navigating protein landscapes with a machine-learned transferable coarse-grained model NE Charron, F Musil, A Guljas, Y Chen, K Bonneau, AS Pasos-Trejo, ... arXiv preprint arXiv:2310.18278, 2023 | 15 | 2023 |
Validation of the alchemical transfer method for the estimation of relative binding affinities of molecular series F Sabanés Zariquiey, A Pérez, M Majewski, E Gallicchio, G De Fabritiis Journal of chemical information and modeling 63 (8), 2438-2444, 2023 | 13 | 2023 |
Assessment of short-term survival after liver transplant by the Model for End-Stage Liver Disease AL Buenadicha, LG Martı́n, EE Martı́n, AM Pérez, CC Seral, RB Marugán Transplantation proceedings 37 (9), 3881-3883, 2005 | 13 | 2005 |
Small molecule modulation of intrinsically disordered proteins using molecular dynamics simulations P Herrera-Nieto, A Pérez, G De Fabritiis Journal of Chemical Information and Modeling 60 (10), 5003-5010, 2020 | 12 | 2020 |
Pan y Cereales E Martín, B De Mateo, A Miján, AM Pérez, P Redondo, I Sáenz Dirección General de Salud Pública y Alimentación, Comunidad de Madrid, 2007 | 10 | 2007 |
A avaliação do DNA como prova forense FAM Duarte, AM Perez, SD Pena, M Barros, E Rossi Ribeirão Preto: FUNPEC. 283p, 2001 | 10 | 2001 |
The role of hydrophobic nodes in the dynamics of class A β-lactamases E Olehnovics, J Yin, A Pérez, G De Fabritiis, RA Bonomo, D Bhowmik, ... Frontiers in Microbiology 12, 720991, 2021 | 7 | 2021 |
Reflexión sobre la situación actual de los tutores docentes y la docencia de Anestesiología y Reanimación en nuestro país A Alcón, J Blázquez, FJG Torrado, J Hortal, JMS Ball, C Navarro, ... Revista española de anestesiología y reanimación 54 (7), 454-455, 2007 | 7 | 2007 |
Cálculo de necesidades en el paciente oncológico A Miján, A Pérez Soporte Nutr en el Paciente Oncológico, 97-113, 2006 | 5 | 2006 |
Gas geochemistry related to wellhead production data to investigate physical reservoir phenomena in geothermal reservoirs: application at Cerro Prieto IV (Mexico) RM Barragán, VM Arellano, MH Rodríguez, A Pérez, N Segovia Geofluids 10 (4), 511-524, 2010 | 4 | 2010 |
Binding-and-folding recognition of an intrinsically disordered protein using online learning molecular dynamics P Herrera-Nieto, A Pérez, G De Fabritiis Journal of Chemical Theory and Computation 19 (13), 3817-3824, 2023 | 3 | 2023 |
‘Onion-peel’cracking and spalling in coupled meso-mechanical analysis of External Sulfate Attack in concrete using zero-thickness interface elements C Biscaro, A Martínez, A Pérez, G Xotta, CM López, I Carol Construction and Building Materials 455, 139011, 2024 | 1 | 2024 |