Charlotte Soneson

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	总计	2019 年至今
引用	17299	14198
h 指数	42	36
i10 指数	69	63

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Mark D. RobinsonFull Professor of Statistical Genomics, University of Zurich在 mls.uzh.ch 的电子邮件经过验证
Mauro DelorenziSIB Swiss Institute of Bioinformatics在 unil.ch 的电子邮件经过验证
Michael I. LoveAssociate Professor, Biostatistics & Genetics, UNC-Chapel Hill在 email.unc.edu 的电子邮件经过验证
Rob PatroAssociate Professor, Department of Computer Science, University of Maryland在 cs.umd.edu 的电子邮件经过验证
Magnus FontesGeneral Manager Institut Roche, Professor of Mathematics, Lund University在 roche.com 的电子邮件经过验证
Helena L. CrowellPostdoc - CNAG, Barcelona, Spain在 cnag.eu 的电子邮件经过验证
Kevin RUE-ALBRECHTOxford University在 imm.ox.ac.uk 的电子邮件经过验证
Davide RissoDepartment of Statistical Sciences, University of Padova, Italy在 unipd.it 的电子邮件经过验证
Koen Van den BergeJ&J Innovative Medicine在 berkeley.edu 的电子邮件经过验证
Lieven ClementAssociate Professor in Statistical Genomics, Ghent University在 ugent.be 的电子邮件经过验证
Michael B. StadlerHead of Computational Biology, Friedrich Miescher Institute for Biomedical Research, Switzerland在 fmi.ch 的电子邮件经过验证
Stephanie C. HicksAssociate Professor, Johns Hopkins Bloomberg School of Public Health在 jhu.edu 的电子邮件经过验证
Federico MariniBioinformatics Group Leader@Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI)在 uni-mainz.de 的电子邮件经过验证
Aaron LunGenentech, Inc.在 gene.com 的电子邮件经过验证
Raphael GottardoLausanne University Hospital and University of Lausanne在 chuv.ch 的电子邮件经过验证
Wolfgang HuberEMBL - European Molecular Biology Laboratory在 embl.org 的电子邮件经过验证
Robert A. Amezquita, PhDSr Computational Immunologist在 pfizer.com 的电子邮件经过验证
Levi WaldronCity University of New York Graduate School of Public Health and Health Policy在 sph.cuny.edu 的电子邮件经过验证
Ludwig GeistlingerCenter for Computational Biomedicine, Harvard Medical School在 hms.harvard.edu 的电子邮件经过验证
Lindsay N. CarppFred Hutchinson Cancer Research Center在 fredhutch.org 的电子邮件经过验证

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Charlotte Soneson

Research Associate, FMI, Basel

在 fmi.ch 的电子邮件经过验证 - 首页


标题按引用次数排序按年份排序按标题排序	引用次数引用次数	年份
The consensus molecular subtypes of colorectal cancer J Guinney, R Dienstmann, X Wang, A De Reynies, A Schlicker, ... Nature medicine 21 (11), 1350-1356, 2015	4924	2015
Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences C Soneson, MI Love, MD Robinson F1000Research 4, 2015	3980	2015
A comparison of methods for differential expression analysis of RNA-seq data C Soneson, M Delorenzi BMC bioinformatics 14, 1-18, 2013	1136	2013
Orchestrating single-cell analysis with Bioconductor RA Amezquita, ATL Lun, E Becht, VJ Carey, LN Carpp, L Geistlinger, ... Nature methods 17 (2), 137-145, 2020	748	2020
Bias, robustness and scalability in single-cell differential expression analysis C Soneson, MD Robinson Nature methods 15 (4), 255-261, 2018	734	2018
Distal and proximal colon cancers differ in terms of molecular, pathological, and clinical features E Missiaglia, B Jacobs, G D'ario, AF Di Narzo, C Soneson, E Budinska, ... Annals of oncology 25 (10), 1995-2001, 2014	694	2014
A systematic performance evaluation of clustering methods for single-cell RNA-seq data A Duò, MD Robinson, C Soneson F1000Research 7, 2018	369	2018
Serum neurofilament light chain in early relapsing remitting MS is increased and correlates with CSF levels and with MRI measures of disease severity J Kuhle, C Barro, G Disanto, A Mathias, C Soneson, G Bonnier, Ö Yaldizli, ... Multiple Sclerosis Journal 22 (12), 1550-1559, 2016	285	2016
Tximeta: Reference sequence checksums for provenance identification in RNA-seq MI Love, C Soneson, PF Hickey, LK Johnson, NT Pierce, L Shepherd, ... PLoS computational biology 16 (2), e1007664, 2020	249	2020
A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes C Soneson, Y Yao, A Bratus-Neuenschwander, A Patrignani, ... Nature communications 10 (1), 3359, 2019	236	2019
muscat detects subpopulation-specific state transitions from multi-sample multi-condition single-cell transcriptomics data HL Crowell, C Soneson, PL Germain, D Calini, L Collin, C Raposo, ... Nature communications 11 (1), 6077, 2020	235	2020
Long-lasting stem cell–like memory CD8⁺ T cells with a naïve-like profile upon yellow fever vaccination SA Fuertes Marraco, C Soneson, L Cagnon, PO Gannon, M Allard, ... Science translational medicine 7 (282), 282ra48-282ra48, 2015	215	2015
Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications K Van den Berge, F Perraudeau, C Soneson, MI Love, D Risso, JP Vert, ... Genome biology 19, 1-17, 2018	213	2018
diffcyt: Differential discovery in high-dimensional cytometry via high-resolution clustering LM Weber, M Nowicka, C Soneson, MD Robinson Communications biology 2 (1), 183, 2019	207	2019
Alignment and mapping methodology influence transcript abundance estimation A Srivastava, L Malik, H Sarkar, M Zakeri, F Almodaresi, C Soneson, ... Genome biology 21, 1-29, 2020	164	2020
Essential guidelines for computational method benchmarking LM Weber, W Saelens, R Cannoodt, C Soneson, A Hapfelmeier, ... Genome biology 20, 1-12, 2019	157	2019
RNA sequencing data: hitchhiker's guide to expression analysis K Van den Berge, KM Hembach, C Soneson, S Tiberi, L Clement, MI Love, ... Annual Review of Biomedical Data Science 2 (1), 139-173, 2019	155	2019
Isoform prefiltering improves performance of count-based methods for analysis of differential transcript usage C Soneson, KL Matthes, M Nowicka, CW Law, MD Robinson Genome biology 17, 1-15, 2016	151	2016
Swimming downstream: statistical analysis of differential transcript usage following Salmon quantification MI Love, C Soneson, R Patro F1000Research 7, 2018	136	2018
Modulation of mTOR signalling triggers the formation of stem cell-like memory T cells G Scholz, C Jandus, L Zhang, C Grandclément, IC Lopez-Mejia, ... EBioMedicine 4, 50-61, 2016	121	2016

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