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Ranadip Pal
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A community effort to assess and improve drug sensitivity prediction algorithms
JC Costello, LM Heiser, E Georgii, M Gönen, MP Menden, NJ Wang, ...
Nature biotechnology 32 (12), 1202-1212, 2014
7962014
Functionally defined therapeutic targets in diffuse intrinsic pontine glioma
CS Grasso, Y Tang, N Truffaux, NE Berlow, L Liu, MA Debily, MJ Quist, ...
Nature medicine 21 (6), 555-559, 2015
6602015
Integrated analysis of transcriptomic and proteomic data
S Haider, R Pal
Current genomics 14 (2), 91-110, 2013
4542013
Optimal infinite-horizon control for probabilistic Boolean networks
R Pal, A Datta, ER Dougherty
IEEE Transactions on Signal Processing 54 (6), 2375-2387, 2006
3012006
Inferring causal molecular networks: empirical assessment through a community-based effort
SM Hill, LM Heiser, T Cokelaer, M Unger, NK Nesser, DE Carlin, Y Zhang, ...
Nature methods 13 (4), 310-318, 2016
2582016
Intervention in context-sensitive probabilistic Boolean networks
R Pal, A Datta, ML Bittner, ER Dougherty
Bioinformatics 21 (7), 1211-1218, 2005
2172005
Evidence for an unanticipated relationship between undifferentiated pleomorphic sarcoma and embryonal rhabdomyosarcoma
BP Rubin, K Nishijo, HIH Chen, X Yi, DP Schuetze, R Pal, SI Prajapati, ...
Cancer cell 19 (2), 177-191, 2011
2112011
Generating Boolean networks with a prescribed attractor structure
R Pal, I Ivanov, A Datta, ML Bittner, ER Dougherty
Bioinformatics 21 (21), 4021-4025, 2005
1892005
Gesture recognition for smart home applications using portable radar sensors
Q Wan, Y Li, C Li, R Pal
2014 36th annual international conference of the IEEE engineering in …, 2014
1672014
A Bayesian connectivity-based approach to constructing probabilistic gene regulatory networks
X Zhou, X Wang, R Pal, I Ivanov, M Bittner, ER Dougherty
Bioinformatics 20 (17), 2918-2927, 2004
1182004
Representation of features as images with neighborhood dependencies for compatibility with convolutional neural networks
O Bazgir, R Zhang, SR Dhruba, R Rahman, S Ghosh, R Pal
Nature communications 11 (1), 4391, 2020
1102020
An ensemble based top performing approach for NCI-DREAM drug sensitivity prediction challenge
Q Wan, R Pal
PloS one 9 (6), e101183, 2014
922014
Rhabdomyosarcoma: current challenges and their implications for developing therapies
S Hettmer, Z Li, AN Billin, FG Barr, DDW Cornelison, AR Ehrlich, ...
Cold Spring Harbor Perspectives in Medicine 4 (11), a025650, 2014
912014
Control approaches for probabilistic gene regulatory networks-what approaches have been developed for addreassinig the issue of intervention?
A Datta, R Pal, A Choudhary, ER Dougherty
IEEE Signal Processing Magazine 24 (1), 54-63, 2007
902007
A high-throughput in vitro drug screen in a genetically engineered mouse model of diffuse intrinsic pontine glioma identifies BMS-754807 as a promising therapeutic agent
KG Halvorson, KL Barton, K Schroeder, KL Misuraca, C Hoeman, ...
PloS one 10 (3), e0118926, 2015
822015
IntegratedMRF: random forest-based framework for integrating prediction from different data types
R Rahman, J Otridge, R Pal
Bioinformatics 33 (9), 1407-1410, 2017
752017
Heterogeneity aware random forest for drug sensitivity prediction
R Rahman, K Matlock, S Ghosh, R Pal
Scientific reports 7 (1), 11347, 2017
732017
Robust intervention in probabilistic Boolean networks
R Pal, A Datta, ER Dougherty
IEEE Transactions on Signal Processing 56 (3), 1280-1294, 2008
692008
Functional random forest with applications in dose-response predictions
R Rahman, SR Dhruba, S Ghosh, R Pal
Scientific reports 9 (1), 1628, 2019
682019
The HDAC3–SMARCA4–miR-27a axis promotes expression of the PAX3:FOXO1 fusion oncogene in rhabdomyosarcoma
N Bharathy, NE Berlow, E Wang, J Abraham, TP Settelmeyer, JE Hooper, ...
Science signaling 11 (557), eaau7632, 2018
662018
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