| GANs for biological image synthesis A Osokin, A Chessel, RE Carazo Salas, F Vaggi Proceedings of the IEEE international conference on computer vision, 2233-2242, 2017 | 146 | 2017 |
| Sustainable computational science: the ReScience initiative NP Rougier, K Hinsen, F Alexandre, T Arildsen, LA Barba, FCY Benureau, ... PeerJ Computer Science 3, e142, 2017 | 120 | 2017 |
| An insulin-to-insulin regulatory network orchestrates phenotypic specificity in development and physiology DA Fernandes de Abreu, A Caballero, P Fardel, N Stroustrup, Z Chen, ... PLoS genetics 10 (3), e1004225, 2014 | 120 | 2014 |
| The Eps8/IRSp53/VASP network differentially controls actin capping and bundling in filopodia formation F Vaggi, A Disanza, F Milanesi, PP Di Fiore, E Menna, M Matteoli, NS Gov, ... PLoS computational biology 7 (7), e1002088, 2011 | 72 | 2011 |
| Spatial segregation of polarity factors into distinct cortical clusters is required for cell polarity control J Dodgson, A Chessel, M Yamamoto, F Vaggi, S Cox, E Rosten, ... Nature communications 4 (1), 1834, 2013 | 57 | 2013 |
| Models of breast morphogenesis based on localization of stem cells in the developing mammary lobule G Honeth, T Schiavinotto, F Vaggi, R Marlow, T Kanno, I Shinomiya, ... Stem Cell Reports 4 (4), 699-711, 2015 | 37 | 2015 |
| MuSCA: a multi-scale source–sink carbon allocation model to explore carbon allocation in plants. An application to static apple tree structures F Reyes, B Pallas, C Pradal, F Vaggi, D Zanotelli, M Tagliavini, D Gianelle, ... Annals of Botany 126 (4), 571-585, 2020 | 23 | 2020 |
| Linkers of cell polarity and cell cycle regulation in the fission yeast protein interaction network F Vaggi, J Dodgson, A Bajpai, A Chessel, F Jordán, M Sato, ... Public Library of Science 8 (10), e1002732, 2012 | 21 | 2012 |
| Competition in the chaperone-client network subordinates cell-cycle entry to growth and stress DF Moreno, E Parisi, G Yahya, F Vaggi, A Csikász-Nagy, M Aldea Life Science Alliance 2 (2), 2019 | 20 | 2019 |
| A self-supervised approach to hierarchical forecasting with applications to groupwise synthetic controls K Mishchenko, M Montgomery, F Vaggi arXiv preprint arXiv:1906.10586, 2019 | 17 | 2019 |
| The effects of an editor serving as one of the reviewers during the peer-review process M Giordan, A Csikasz-Nagy, AM Collings, F Vaggi F1000Research 5, 683, 2016 | 11 | 2016 |
| Reconstructing regulatory pathways by systematically mapping protein localization interdependency networks J Dodgson, A Chessel, F Vaggi, M Giordan, M Yamamoto, K Arai, ... bioRxiv, 116749, 2017 | 10 | 2017 |
| A network approach to mixing delegates at meetings F Vaggi, T Schiavinotto, JLD Lawson, A Chessel, J Dodgson, ... Elife 3, e02273, 2014 | 8 | 2014 |
| Sustainable computational science: The ReScience Initiative, PeerJ Computer Science, 3, e142 NP Rougier, K Hinsen, F Alexandre, T Arildsen, LA Barba, FCY Benureau, ... | 5 | 2017 |
| Process modeling and rendering of biochemical structures: actin O Kahramanoğulları, A Phillips, F Vaggi Biomechanics of Cells and Tissues: Experiments, Models and Simulations, 45-63, 2013 | 4 | 2013 |
| Comparative analysis of the intracellular responses to disease-related aggregation-prone proteins A Melnik, V Cappelletti, F Vaggi, I Piazza, M Tognetti, C Schwarz, ... Journal of proteomics 225, 103862, 2020 | 3 | 2020 |
| MuSCA: a multi-scale model to explore carbon allocation in plants F Reyes, B Pallas, C Pradal, F Vaggi, D Zanotelli, M Tagliavini, D Gianelle, ... bioRxiv, 370189, 2018 | 2 | 2018 |
| On the maximization of likelihoods belonging to the exponential family using a Levenberg–Marquardt approach M Giordan, F Vaggi, R Wehrens Journal of Statistical Computation and Simulation 87 (5), 895-907, 2017 | 2 | 2017 |
| “Keystone Species” of Molecular Interaction Networks F Vaggi, A Csikász-Nagy Developments in Environmental Modelling 25, 73-88, 2012 | 2 | 2012 |
| On the maximization of likelihoods belonging to the exponential family using ideas related to the Levenberg-Marquardt approach M Giordan, F Vaggi, R Wehrens arXiv preprint arXiv:1410.0793, 2014 | 1 | 2014 |
