| Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages EL Gautier, T Shay, J Miller, M Greter, C Jakubzick, S Ivanov, J Helft, ... Nature immunology 13 (11), 1118-1128, 2012 | 2214 | 2012 |
| Densely interconnected transcriptional circuits control cell states in human hematopoiesis N Novershtern, A Subramanian, LN Lawton, RH Mak, WN Haining, ... Cell 144 (2), 296-309, 2011 | 1101 | 2011 |
| Deciphering the transcriptional network of the dendritic cell lineage JC Miller, BD Brown, T Shay, EL Gautier, V Jojic, A Cohain, G Pandey, ... Nature immunology 13 (9), 888, 2012 | 858 | 2012 |
| Stem cell-related" self-renewal" signature and high epidermal growth factor receptor expression associated with resistance to concomitant chemoradiotherapy in glioblastoma A Murat, E Migliavacca, T Gorlia, WL Lambiv, T Shay, MF Hamou, ... Journal of clinical oncology 26 (18), 3015-24, 2008 | 827 | 2008 |
| A module of negative feedback regulators defines growth factor signaling I Amit, A Citri, T Shay, Y Lu, M Katz, F Zhang, G Tarcic, D Siwak, J Lahad, ... Nature genetics 39 (4), 503-512, 2007 | 620 | 2007 |
| Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses I Amit, M Garber, N Chevrier, AP Leite, Y Donner, T Eisenhaure, ... Science 326 (5950), 257-263, 2009 | 571 | 2009 |
| Conservation and divergence in the transcriptional programs of the human and mouse immune systems T Shay, V Jojic, O Zuk, K Rothamel, D Puyraimond-Zemmour, T Feng, ... Proceedings of the National Academy of Sciences 110 (8), 2946-2951, 2013 | 382 | 2013 |
| γδ T cells producing interleukin-17A regulate adipose regulatory T cell homeostasis and thermogenesis AC Kohlgruber, ST Gal-Oz, NM LaMarche, M Shimazaki, D Duquette, ... Nature immunology 19 (5), 464-474, 2018 | 331 | 2018 |
| The execution of the transcriptional axis mutant p53, E2F1 and ID4 promotes tumor neo-angiogenesis G Fontemaggi, S Dell'Orso, D Trisciuoglio, T Shay, E Melucci, F Fazi, ... Nature structural & molecular biology 16 (10), 1086, 2009 | 242 | 2009 |
| ImmGen report: sexual dimorphism in the immune system transcriptome ST Gal-Oz, B Maier, H Yoshida, K Seddu, N Elbaz, C Czysz, O Zuk, ... Nature communications 10 (1), 1-14, 2019 | 240 | 2019 |
| A reciprocal tensin-3–cten switch mediates EGF-driven mammary cell migration M Katz, I Amit, A Citri, T Shay, S Carvalho, S Lavi, F Milanezi, L Lyass, ... nature cell biology 9 (8), 961-969, 2007 | 225 | 2007 |
| Transcriptional regulatory circuits: predicting numbers from alphabets HD Kim, T Shay, EK O’Shea, A Regev Science 325 (5939), 429-432, 2009 | 212 | 2009 |
| Identification of transcriptional regulators in the mouse immune system V Jojic, T Shay, K Sylvia, O Zuk, X Sun, J Kang, A Regev, D Koller Nature immunology 14 (6), 633-643, 2013 | 208 | 2013 |
| Immunological Genome Project and systems immunology T Shay, J Kang Trends in immunology 34 (12), 602-609, 2013 | 176 | 2013 |
| Shared and distinct transcriptional programs underlie the hybrid nature of i NKT cells NR Cohen, PJ Brennan, T Shay, GF Watts, M Brigl, J Kang, MB Brenner Nature immunology 14 (1), 90-99, 2013 | 138 | 2013 |
| The Wnt inhibitory factor 1 (WIF1) is targeted in glioblastoma and has a tumor suppressing function potentially by induction of senescence WL Lambiv, I Vassallo, M Delorenzi, T Shay, AC Diserens, A Misra, ... Neuro-oncology 13 (7), 736-747, 2011 | 129 | 2011 |
| CaSTLe–classification of single cells by transfer learning: harnessing the power of publicly available single cell RNA sequencing experiments to annotate new experiments Y Lieberman, L Rokach, T Shay PloS one 13 (10), e0205499, 2018 | 126 | 2018 |
| Transcriptome analysis identifies regulators of hematopoietic stem and progenitor cells R Gazit, BS Garrison, TN Rao, T Shay, J Costello, J Ericson, F Kim, ... Stem cell reports 1 (3), 266-280, 2013 | 121 | 2013 |
| Two phases of mitogenic signaling unveil roles for p53 and EGR1 in elimination of inconsistent growth signals Y Zwang, A Sas-Chen, Y Drier, T Shay, R Avraham, M Lauriola, E Shema, ... Molecular cell 42 (4), 524-535, 2011 | 119 | 2011 |
| Chromosome 7 gain and DNA hypermethylation at the HOXA10 locus are associated with expression of a stem cell related HOX-signature in glioblastoma S Kurscheid, P Bady, D Sciuscio, I Samarzija, T Shay, I Vassallo, ... Genome biology 16 (1), 1-15, 2015 | 116 | 2015 |
