Theo dõi
Davit Potoyan
Davit Potoyan
Associate Professor, Iowa State University
Email được xác minh tại iastate.edu - Trang chủ
Tiêu đề
Trích dẫn bởi
Trích dẫn bởi
Năm
Sequence-encoded and composition-dependent protein-RNA interactions control multiphasic condensate morphologies
T Kaur, M Raju, I Alshareedah, RB Davis, DA Potoyan, PR Banerjee
Nature communications 12 (1), 872, 2021
1932021
Phase transition of RNA− protein complexes into ordered hollow condensates
I Alshareedah, MM Moosa, M Raju, DA Potoyan, PR Banerjee
Proceedings of the National Academy of Sciences 117 (27), 15650-15658, 2020
1842020
Programmable viscoelasticity in protein-RNA condensates with disordered sticker-spacer polypeptides
I Alshareedah, MM Moosa, M Pham, DA Potoyan, PR Banerjee
Nature communications 12 (1), 6620, 2021
1772021
Anomalous diffusion, spatial coherence, and viscoelasticity from the energy landscape of human chromosomes
M Di Pierro, DA Potoyan, PG Wolynes, JN Onuchic
Proceedings of the National Academy of Sciences 115 (30), 7753-7758, 2018
1492018
Recent successes in coarse‐grained modeling of DNA
DA Potoyan, A Savelyev, GA Papoian
Wiley Interdisciplinary Reviews: Computational Molecular Science, 2013
1222013
Energy landscape analyses of disordered histone tails reveal special organization of their conformational dynamics
DA Potoyan, GA Papoian
Journal of the American Chemical Society 133 (19), 7405-7415, 2011
1192011
Regulation of the H4 tail binding and folding landscapes via Lys-16 acetylation
DA Potoyan, GA Papoian
Proceedings of the National Academy of Sciences, 2012
992012
Molecular stripping in the NF-κB/IκB/DNA genetic regulatory network
DA Potoyan, W Zheng, EA Komives, PG Wolynes
Proceedings of the National Academy of Sciences 113 (1), 110-115, 2016
932016
The acetylation landscape of the H4 histone tail: disentangling the interplay between the specific and cumulative effects
D Winogradoff, I Echeverria, DA Potoyan, GA Papoian
Journal of the American Chemical Society 137 (19), 6245-6253, 2015
772015
A stochastic and dynamical view of pluripotency in mouse embryonic stem cells
YT Lin, PG Hufton, EJ Lee, DA Potoyan
PLoS computational biology 14 (2), e1006000, 2018
452018
On the dephasing of genetic oscillators
D Potoyan, P Wolynes
Proceedings of the National Academy of Sciences 111, 2391-2396, 2014
442014
The interplay of chromatin phase separation and lamina interactions in nuclear organization
R Laghmach, M Di Pierro, DA Potoyan
Biophysical Journal 120, 5005–5017, 2021
362021
RNA chain length and stoichiometry govern surface tension and stability of protein-RNA condensates
R Laghmach, I Alshareedah, M Pham, M Raju, PR Banerjee, DA Potoyan
Iscience 25 (4), 2022
342022
Resolving the NFκB heterodimer binding paradox: strain and frustration guide the binding of dimeric transcription factors
DA Potoyan, C Bueno, W Zheng, EA Komives, PG Wolynes
Journal of the American Chemical Society 139 (51), 18558-18566, 2017
342017
Computing free energy of a large-scale allosteric transition in adenylate kinase using all atom explicit solvent simulations
DA Potoyan, PI Zhuravlev, GA Papoian
The Journal of Physical Chemistry B 116 (5), 1709-1715, 2012
332012
Determinants of viscoelasticity and flow activation energy in biomolecular condensates
I Alshareedah, A Singh, S Yang, V Ramachandran, A Quinn, DA Potoyan, ...
Science Advances 10 (7), eadi6539, 2024
302024
Molecular stripping, targets and decoys as modulators of oscillations in the NF-κB/IκBα/DNA genetic network
Z Wang, DA Potoyan, PG Wolynes
Journal of The Royal Society Interface 13 (122), 20160606, 2016
292016
Mesoscale liquid model of chromatin recapitulates nuclear order of eukaryotes.
R Laghmach, M Di Pierro, DA Potoyan
Biophysical Journal 117, 1-11, 2020
272020
Dichotomous noise models of gene switches
D Potoyan, P Wolynes
The Journal of chemical physics 143 (19), 2015
242015
Hybrid thermophilic/mesophilic enzymes reveal a role for conformational disorder in regulation of bacterial enzyme I
RR Dotas, TT Nguyen, CE Stewart Jr, R Ghirlando, DA Potoyan, V Venditti
Journal of molecular biology 432 (16), 4481-4498, 2020
232020
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