Theo dõi
Tanja Woyke
Tanja Woyke
DOE Joint Genome Institute
Email được xác minh tại lbl.gov
Tiêu đề
Trích dẫn bởi
Trích dẫn bởi
Năm
Insights into the phylogeny and coding potential of microbial dark matter
C Rinke, P Schwientek, A Sczyrba, NN Ivanova, IJ Anderson, JF Cheng, ...
Nature 499 (7459), 431-437, 2013
25082013
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ...
Nature biotechnology 35 (8), 725-731, 2017
18642017
Metagenomic discovery of biomass-degrading genes and genomes from cow rumen
M Hess, A Sczyrba, R Egan, TW Kim, H Chokhawala, G Schroth, S Luo, ...
Science 331 (6016), 463-467, 2011
15212011
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products
S Nurk, A Bankevich, D Antipov, AA Gurevich, A Korobeynikov, A Lapidus, ...
Journal of Computational Biology 20 (10), 714-737, 2013
12272013
Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
PM Shih, D Wu, A Latifi, SD Axen, DP Fewer, E Talla, A Calteau, F Cai, ...
Proceedings of the National Academy of Sciences 110 (3), 1053-1058, 2013
8852013
IMG/M v. 5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
IMA Chen, K Chu, K Palaniappan, M Pillay, A Ratner, J Huang, ...
Nucleic acids research 47 (D1), D666-D677, 2019
8672019
Assembling genomes and mini-metagenomes from highly chimeric reads
S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ...
Research in Computational Molecular Biology: 17th Annual International …, 2013
8612013
Critical assessment of metagenome interpretation—a benchmark of metagenomics software
A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ...
Nature methods 14 (11), 1063-1071, 2017
8212017
Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma
YJ Huang, CE Nelson, EL Brodie, TZ DeSantis, MS Baek, J Liu, T Woyke, ...
Journal of Allergy and Clinical Immunology 127 (2), 372-381. e3, 2011
8162011
Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis
A Sessitsch, P Hardoim, J Döring, A Weilharter, A Krause, T Woyke, ...
Molecular Plant-Microbe Interactions 25 (1), 28-36, 2012
8042012
Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
D Coleman‐Derr, D Desgarennes, C Fonseca‐Garcia, S Gross, ...
New Phytologist 209 (2), 798-811, 2016
7432016
A genomic catalog of Earth’s microbiomes
S Nayfach, S Roux, R Seshadri, D Udwary, N Varghese, F Schulz, D Wu, ...
Nature biotechnology 39 (4), 499-509, 2021
7282021
Genome-based taxonomic classification of the phylum Actinobacteria
I Nouioui, L Carro, M García-López, JP Meier-Kolthoff, T Woyke, ...
Frontiers in microbiology 9, 355158, 2018
6752018
Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
OU Mason, TC Hazen, S Borglin, PSG Chain, EA Dubinsky, JL Fortney, ...
The ISME journal 6 (9), 1715-1727, 2012
6382012
IMG 4 version of the integrated microbial genomes comparative analysis system
VM Markowitz, IMA Chen, K Palaniappan, K Chu, E Szeto, M Pillay, ...
Nucleic acids research 42 (D1), D560-D567, 2014
6012014
Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean
BK Swan, M Martinez-Garcia, CM Preston, A Sczyrba, T Woyke, D Lamy, ...
Science 333 (6047), 1296-1300, 2011
5932011
Minimum information about an uncultivated virus genome (MIUViG)
S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ...
Nature biotechnology 37 (1), 29-37, 2019
5792019
Primer and platform effects on 16S rRNA tag sequencing
J Tremblay, K Singh, A Fern, ES Kirton, S He, T Woyke, J Lee, F Chen, ...
Frontiers in microbiology 6, 771, 2015
5682015
Genomic features of bacterial adaptation to plants
A Levy, I Salas Gonzalez, M Mittelviefhaus, S Clingenpeel, ...
Nature genetics 50 (1), 138-150, 2018
5652018
Symbiosis insights through metagenomic analysis of a microbial consortium
T Woyke, H Teeling, NN Ivanova, M Huntemann, M Richter, FO Gloeckner, ...
Nature 443 (7114), 950-955, 2006
5572006
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