Activation of the Protein Deacetylase SIRT6 by Long-chain Fatty Acids and Widespread Deacylation by Mammalian Sirtuins*♦ JL Feldman, J Baeza, JM Denu Journal of Biological Chemistry 288 (43), 31350-31356, 2013 | 694 | 2013 |
Mechanisms and dynamics of protein acetylation in mitochondria J Baeza, MJ Smallegan, JM Denu Trends in biochemical sciences 41 (3), 231-244, 2016 | 316 | 2016 |
Site-specific reactivity of nonenzymatic lysine acetylation J Baeza, MJ Smallegan, JM Denu ACS chemical biology 10 (1), 122-128, 2015 | 192 | 2015 |
Stoichiometry of Site-specific Lysine Acetylation in an Entire Proteome*♦ J Baeza, JA Dowell, MJ Smallegan, J Fan, D Amador-Noguez, Z Khan, ... Journal of Biological Chemistry 289 (31), 21326-21338, 2014 | 175 | 2014 |
Dynamic acetylation of phosphoenolpyruvate carboxykinase toggles enzyme activity between gluconeogenic and anaplerotic reactions P Latorre-Muro, J Baeza, EA Armstrong, R Hurtado-Guerrero, F Corzana, ... Molecular cell 71 (5), 718-732. e9, 2018 | 74 | 2018 |
Improved SILAC quantification with data-independent acquisition to investigate bortezomib-induced protein degradation LK Pino, J Baeza, R Lauman, B Schilling, BA Garcia Journal of proteome research 20 (4), 1918-1927, 2021 | 50 | 2021 |
Rapid identification of ESKAPE bacterial strains using an autonomous microfluidic device JY Ho, NJ Cira, JA Crooks, J Baeza, DB Weibel PLoS One 7 (7), e41245, 2012 | 37 | 2012 |
Revealing dynamic protein acetylation across subcellular compartments J Baeza, AJ Lawton, J Fan, MJ Smallegan, I Lienert, T Gandhi, ... Journal of proteome research 19 (6), 2404-2418, 2020 | 35 | 2020 |
Deep profiling and custom databases improve detection of proteoforms generated by alternative splicing LM Agosto, MR Gazzara, CM Radens, S Sidoli, J Baeza, BA Garcia, ... Genome research 29 (12), 2046-2055, 2019 | 35 | 2019 |
The E3 ligase adaptor molecule SPOP regulates fetal hemoglobin levels in adult erythroid cells X Lan, E Khandros, P Huang, SA Peslak, SK Bhardwaj, JD Grevet, ... Blood Advances 3 (10), 1586-1597, 2019 | 33 | 2019 |
Investigating histone acetylation stoichiometry and turnover rate J Fan, J Baeza, JM Denu Methods in Enzymology 574, 125-148, 2016 | 20 | 2016 |
Sex‐specific effects of in vitro fertilization on adult metabolic outcomes and hepatic transcriptome and proteome in mouse L Narapareddy, EA Rhon‐Calderon, LA Vrooman, J Baeza, DK Nguyen, ... The FASEB Journal 35 (4), e21523, 2021 | 19 | 2021 |
Self-acetylation at the active site of phosphoenolpyruvate carboxykinase (PCK1) controls enzyme activity P Latorre-Muro, J Baeza, R Hurtado-Guerrero, T Hicks, I Delso, ... Journal of Biological Chemistry 296, 2021 | 11 | 2021 |
Site-specific lysine acetylation stoichiometry across subcellular compartments AJ Lindahl, AJ Lawton, J Baeza, JA Dowell, JM Denu Protein Acetylation: Methods and Protocols, 79-106, 2019 | 9 | 2019 |
Human immunodeficiency virus enhances hepatitis C virus replication by differential regulation of IFN and TGF family genes X Zhang, M Daucher, J Baeza, CW Kim, R Russell, S Kottilil Journal of medical virology 84 (9), 1344-1352, 2012 | 9 | 2012 |
Scalable and purification-free synthesis of a myristoylated fluorogenic sirtuin substrate I Galleano, J Nielsen, AS Madsen, CA Olsen Synlett 28 (16), 2169-2173, 2017 | 8 | 2017 |
Histone chaperone HIRA, promyelocytic leukemia protein, and p62/SQSTM1 coordinate to regulate inflammation during cell senescence N Dasgupta, X Lei, CH Shi, R Arnold, MG Teneche, KN Miller, A Rajesh, ... Molecular Cell 84 (17), 3271-3287. e8, 2024 | 4 | 2024 |
Quantifying dynamic protein acetylation using quantitative stoichiometry J Baeza, AJ Lawton, J Fan, MJ Smallegan, I Lienert, T Gandhi, ... Preprint at https://www. biorxiv. org/content/10.1101/472530v1. full, 2018 | 3 | 2018 |
Two DOT1 enzymes cooperatively mediate efficient ubiquitin-independent histone H3 lysine 76 tri-methylation in kinetoplastids VS Frisbie, H Hashimoto, Y Xie, FN De Luna Vitorino, J Baeza, T Nguyen, ... Nature communications 15 (1), 2467, 2024 | 1 | 2024 |
Neuropeptides specify and reprogram division of labor in the leafcutter ant Atta cephalotes MB Gilbert, KM Glastad, M Fioriti, M Sorek, T Gannon, D Xu, LK Pino, ... bioRxiv, 2024.11. 07.622473, 2024 | | 2024 |