Theo dõi
Rob Edwards
Rob Edwards
Matthew Flinders Fellow of Bioinformatics, Flinders University, Adelaide, SA, Australia
Email được xác minh tại flinders.edu.au - Trang chủ
Tiêu đề
Trích dẫn bởi
Trích dẫn bởi
Năm
The RAST Server: rapid annotations using subsystems technology
R Aziz, D Bartels, A Best, M DeJongh, T Disz, R Edwards, K Formsma, ...
BMC genomics 9 (1), 75, 2008
125192008
Quality control and preprocessing of metagenomic datasets
R Schmieder, R Edwards
Bioinformatics 27 (6), 863, 2011
53132011
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
R Overbeek, R Olson, GD Pusch, GJ Olsen, JJ Davis, T Disz, RA Edwards, ...
Nucleic acids research 42 (D1), D206-D214, 2014
46942014
The metagenomics RAST server–a public resource for the automatic phylogenetic and functional analysis of metagenomes
F Meyer, D Paarmann, M D'Souza, R Olson, EM Glass, M Kubal, ...
BMC bioinformatics 9 (1), 386, 2008
41092008
RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes
T Brettin, JJ Davis, T Disz, RA Edwards, S Gerdes, GJ Olsen, R Olson, ...
Scientific reports 5 (1), 8365, 2015
26882015
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ...
Nucleic acids research 33 (17), 5691-5702, 2005
23492005
Community genomics among stratified microbial assemblages in the ocean's interior
EF DeLong, CM Preston, T Mincer, V Rich, SJ Hallam, NU Frigaard, ...
Science 311 (5760), 496-503, 2006
15692006
The minimum information about a genome sequence (MIGS) specification
D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ...
Nature biotechnology 26 (5), 541-547, 2008
13932008
Viral metagenomics
RA Edwards, F Rohwer
Nature Reviews Microbiology 3 (6), 504-510, 2005
11572005
The marine viromes of four oceanic regions
FE Angly, B Felts, M Breitbart, P Salamon, RA Edwards, C Carlson, ...
PLoS biology 4 (11), e368, 2006
11522006
Functional metagenomic profiling of nine biomes
EA Dinsdale, RA Edwards, D Hall, F Angly, M Breitbart, JM Brulc, ...
Nature 452 (7187), 629-632, 2008
11422008
Nitrogen control in bacteria
MJ Merrick, RA Edwards
Microbiological reviews 59 (4), 604-622, 1995
9501995
Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases
JM Brulc, DA Antonopoulos, ME Berg Miller, MK Wilson, AC Yannarell, ...
Proceedings of the National Academy of Sciences 106 (6), 1948-1953, 2009
8802009
The Phage Proteomic Tree: a genome-based taxonomy for phage
F Rohwer, R Edwards
Journal of bacteriology 184 (16), 4529-4535, 2002
8632002
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
BE Dutilh, N Cassman, K McNair, SE Sanchez, GGZ Silva, L Boling, ...
Nature communications 5 (1), 4498, 2014
8602014
Critical assessment of metagenome interpretation—a benchmark of metagenomics software
A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ...
Nature methods 14 (11), 1063-1071, 2017
8212017
Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets
R Schmieder, R Edwards
PLoS One 6 (3), e17288, 2011
8162011
Metagenomic analysis of stressed coral holobionts
RV Thurber, D Willner‐Hall, B Rodriguez‐Mueller, C Desnues, ...
Environmental microbiology 11 (8), 2148-2163, 2009
7322009
Improved allelic exchange vectors and their use to analyze 987P fimbria gene expression
RA Edwards, LH Keller, DM Schifferli
Gene 207 (2), 149-157, 1998
6771998
Metagenomic analysis of the microbial community associated with the coral Porites astreoides
L Wegley, R Edwards, B Rodriguez‐Brito, H Liu, F Rohwer
Environmental microbiology 9 (11), 2707-2719, 2007
6752007
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