DNA methylation arrays as surrogate measures of cell mixture distribution EA Houseman, WP Accomando, DC Koestler, BC Christensen, CJ Marsit, ... BMC bioinformatics 13, 1-16, 2012 | 3265 | 2012 |
Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context BC Christensen, EA Houseman, CJ Marsit, S Zheng, MR Wrensch, ... PLoS genetics 5 (8), e1000602, 2009 | 1283 | 2009 |
DNA methylation aging clocks: challenges and recommendations CG Bell, R Lowe, PD Adams, AA Baccarelli, S Beck, JT Bell, ... Genome biology 20, 1-24, 2019 | 872 | 2019 |
MicroRNA expression ratio is predictive of head and neck squamous cell carcinoma M Avissar, BC Christensen, KT Kelsey, CJ Marsit Clinical Cancer Research 15 (8), 2850-2855, 2009 | 342 | 2009 |
DNA methylation, isocitrate dehydrogenase mutation, and survival in glioma BC Christensen, AA Smith, S Zheng, DC Koestler, EA Houseman, ... Journal of the National Cancer Institute 103 (2), 143-153, 2011 | 336 | 2011 |
An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray LA Salas, DC Koestler, RA Butler, HM Hansen, JK Wiencke, KT Kelsey, ... Genome biology 19, 1-14, 2018 | 333 | 2018 |
Blood-based profiles of DNA methylation predict the underlying distribution of cell types: a validation analysis DC Koestler, BC Christensen, MR Karagas, CJ Marsit, SM Langevin, ... Epigenetics 8 (8), 816-826, 2013 | 271 | 2013 |
Maternal diet during pregnancy is related with the infant stool microbiome in a delivery mode-dependent manner SN Lundgren, JC Madan, JA Emond, HG Morrison, BC Christensen, ... Microbiome 6, 1-11, 2018 | 259 | 2018 |
Review of processing and analysis methods for DNA methylation array data CS Wilhelm-Benartzi, DC Koestler, MR Karagas, JM Flanagan, ... British journal of cancer 109 (6), 1394-1402, 2013 | 247 | 2013 |
A let-7 microRNA-binding site polymorphism in the KRAS 3′ UTR is associated with reduced survival in oral cancers BC Christensen, BJ Moyer, M Avissar, LG Ouellet, SL Plaza, MD McClean, ... Carcinogenesis 30 (6), 1003-1007, 2009 | 238 | 2009 |
Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions EA Houseman, BC Christensen, RF Yeh, CJ Marsit, MR Karagas, ... BMC bioinformatics 9, 1-15, 2008 | 232 | 2008 |
Genome-wide DNA methylation profiles in progression to in situand invasive carcinoma of the breast with impact on gene transcription and prognosis T Fleischer, A Frigessi, KC Johnson, H Edvardsen, N Touleimat, J Klajic, ... Genome biology 15, 1-13, 2014 | 220 | 2014 |
Cell-type deconvolution from DNA methylation: a review of recent applications AJ Titus, RM Gallimore, LA Salas, BC Christensen Human molecular genetics 26 (R2), R216-R224, 2017 | 209 | 2017 |
Breast cancer DNA methylation profiles are associated with tumor size and alcohol and folate intake BC Christensen, KT Kelsey, S Zheng, EA Houseman, CJ Marsit, ... PLoS genetics 6 (7), e1001043, 2010 | 192 | 2010 |
Improving cell mixture deconvolution by identifying optimal DNA methylation libraries (IDOL) DC Koestler, MJ Jones, J Usset, BC Christensen, RA Butler, MS Kobor, ... BMC bioinformatics 17, 1-21, 2016 | 189 | 2016 |
Epigenetic profiles distinguish pleural mesothelioma from normal pleura and predict lung asbestos burden and clinical outcome BC Christensen, EA Houseman, JJ Godleski, CJ Marsit, JL Longacker, ... Cancer research 69 (1), 227-234, 2009 | 179 | 2009 |
Biomarkers of HPV in head and neck squamous cell carcinoma C Liang, CJ Marsit, MD McClean, HH Nelson, BC Christensen, RI Haddad, ... Cancer research 72 (19), 5004-5013, 2012 | 177 | 2012 |
NLRP3 expression in mesencephalic neurons and characterization of a rare NLRP3 polymorphism associated with decreased risk of Parkinson’s disease KM von Herrmann, LA Salas, EM Martinez, AL Young, JM Howard, ... NPJ Parkinson's disease 4 (1), 24, 2018 | 172 | 2018 |
Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling LA Salas, Z Zhang, DC Koestler, RA Butler, HM Hansen, AM Molinaro, ... Nature communications 13 (1), 761, 2022 | 170 | 2022 |
Integrative DNA methylation and gene expression analyses identify DNA packaging and epigenetic regulatory genes associated with low motility sperm SE Pacheco, EA Houseman, BC Christensen, CJ Marsit, KT Kelsey, ... PloS one 6 (6), e20280, 2011 | 166 | 2011 |