Theo dõi
Jakub Westholm
Jakub Westholm
Researcher, SciLifeLab/Stockholm University
Email được xác minh tại scilifelab.se
Tiêu đề
Trích dẫn bởi
Trích dẫn bởi
Năm
Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
PL Ståhl, F Salmén, S Vickovic, A Lundmark, J Fernández Navarro, ...
Science 353 (6294), 78-82, 2016
29582016
Genome-wide analysis of drosophila circular RNAs reveals their structural and sequence properties and age-dependent neural accumulation
JO Westholm, P Miura, S Olson, S Shenker, B Joseph, P Sanfilippo, ...
Cell reports 9 (5), 1966-1980, 2014
9992014
Vive la différence: biogenesis and evolution of microRNAs in plants and animals
MJ Axtell, JO Westholm, EC Lai
Genome biology 12 (4), 221, 2011
6212011
Mirtrons: microRNA biogenesis via splicing
JO Westholm, EC Lai
Biochimie, 2011
4302011
Widespread and extensive lengthening of 3′ UTRs in the mammalian brain
P Miura, S Shenker, C Andreu-Agullo, JO Westholm, EC Lai
Genome research 23 (5), 812-825, 2013
3812013
Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
E Berezikov, N Robine, A Samsonova, JO Westholm, A Naqvi, JH Hung, ...
Genome research 21 (2), 203-215, 2011
2742011
Global patterns of tissue-specific alternative polyadenylation in Drosophila
P Smibert, P Miura, JO Westholm, S Shenker, G May, MO Duff, D Zhang, ...
Cell reports 1 (3), 277-289, 2012
2712012
Discovery of hundreds of mirtrons in mouse and human small RNA data
E Ladewig, K Okamura, AS Flynt, JO Westholm, EC Lai
Genome research 22 (9), 1634-1645, 2012
2592012
Endocan is a VEGF-A and PI3K regulated gene with increased expression in human renal cancer
E Rennel, S Mellberg, A Dimberg, L Petersson, J Botling, A Ameur, ...
Experimental cell research 313 (7), 1285-1294, 2007
1702007
Heterogeneity and interplay of the extracellular vesicle small RNA transcriptome and proteome
H Sork, G Corso, K Krjutskov, HJ Johansson, JZ Nordin, OPB Wiklander, ...
Scientific reports 8 (1), 10813, 2018
1522018
Transcriptional profiling reveals a critical role for tyrosine phosphatase VE‐PTP in regulation of VEGFR2 activity and endothelial cell morphogenesis
S Mellberg, A Dimberg, F Bahram, M Hayashi, E Rennel, A Ameur, ...
The FASEB Journal 23 (5), 1490-1502, 2009
1322009
Acute sleep loss results in tissue-specific alterations in genome-wide DNA methylation state and metabolic fuel utilization in humans
J Cedernaes, M Schönke, JO Westholm, J Mi, A Chibalin, S Voisin, ...
Science advances 4 (8), eaar8590, 2018
1312018
Combinatorial control of gene expression by the three yeast repressors Mig1, Mig2 and Mig3
JO Westholm, N Nordberg, E Murén, A Ameur, J Komorowski, H Ronne
BMC genomics 9, 1-15, 2008
1222008
Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
WJ Chung, P Agius, JO Westholm, M Chen, K Okamura, N Robine, ...
Genome Research 21 (2), 286-300, 2011
972011
The BEN domain is a novel sequence-specific DNA-binding domain conserved in neural transcriptional repressors
Q Dai, A Ren, JO Westholm, AA Serganov, DJ Patel, EC Lai
Genes & development 27 (6), 602-614, 2013
932013
Common and distinct patterns of terminal modifications to mirtrons and canonical microRNAs
JO Westholm, E Ladewig, K Okamura, N Robine, EC Lai
Rna 18 (2), 177-192, 2012
912012
Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics
M Ratz, L von Berlin, L Larsson, M Martin, JO Westholm, G La Manno, ...
Nature neuroscience 25 (3), 285-294, 2022
852022
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
J Wen, J Mohammed, D Bortolamiol-Becet, H Tsai, N Robine, ...
Genome research 24 (7), 1236-1250, 2014
702014
Neurophysiological Defects and Neuronal Gene Deregulation in Drosophila mir-124 Mutants
K Sun, JO Westholm, K Tsurudome, JW Hagen, Y Lu, M Kohwi, D Betel, ...
PLoS genetics 8 (2), e1002515, 2012
672012
Histone modifications influence mediator interactions with chromatin
X Zhu, Y Zhang, G Bjornsdottir, Z Liu, A Quan, M Costanzo, ...
Nucleic acids research 39 (19), 8342-8354, 2011
632011
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