Theo dõi
S. Cenk Sahinalp
S. Cenk Sahinalp
Senior Investigator, Cancer Data Science Lab, National Cancer Institute, NIH
Email được xác minh tại nih.gov - Trang chủ
Tiêu đề
Trích dẫn bởi
Trích dẫn bởi
Năm
A map of human genome variation from population scale sequencing
1000 Genomes Project Consortium
Nature 467 (7319), 1061, 2010
90602010
PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
NY Yu, JR Wagner, MR Laird, G Melli, S Rey, R Lo, P Dao, SC Sahinalp, ...
Bioinformatics 26 (13), 1608-1615, 2010
26832010
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
2544*2020
The evolutionary history of 2,658 cancers
M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ...
Nature 578 (7793), 122-128, 2020
10222020
Personalized copy number and segmental duplication maps using next-generation sequencing
C Alkan, JM Kidd, T Marques-Bonet, G Aksay, F Antonacci, F Hormozdiari, ...
Nature genetics 41 (10), 1061-1067, 2009
10002009
Demographic history and rare allele sharing among human populations
S Gravel, BM Henn, RN Gutenkunst, AR Indap, GT Marth, AG Clark, F Yu, ...
Proceedings of the National Academy of Sciences 108 (29), 11983-11988, 2011
7472011
Genomic hallmarks of localized, non-indolent prostate cancer
M Fraser, VY Sabelnykova, TN Yamaguchi, LE Heisler, J Livingstone, ...
Nature 541 (7637), 359-364, 2017
6562017
deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data
A McPherson, F Hormozdiari, A Zayed, R Giuliany, G Ha, MGF Sun, ...
PLoS computational biology 7 (5), e1001138, 2011
6352011
Spatial genomic heterogeneity within localized, multifocal prostate cancer
PC Boutros, M Fraser, NJ Harding, R De Borja, D Trudel, E Lalonde, ...
Nature genetics 47 (7), 736-745, 2015
5632015
Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes
F Hormozdiari, C Alkan, EE Eichler, SC Sahinalp
Genome research 19 (7), 1270-1278, 2009
3942009
Widespread and functional RNA circularization in localized prostate cancer
S Chen, V Huang, X Xu, J Livingstone, F Soares, J Jeon, Y Zeng, JT Hua, ...
Cell 176 (4), 831-843. e22, 2019
3922019
Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes
SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ...
Cell 184 (8), 2239-2254. e39, 2021
3892021
mrsFAST: a cache-oblivious algorithm for short-read mapping
F Hach, F Hormozdiari, C Alkan, F Hormozdiari, I Birol, EE Eichler, ...
Nature methods 7 (8), 576-577, 2010
3502010
Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa
RD Morin, G Aksay, E Dolgosheina, HA Ebhardt, V Magrini, ER Mardis, ...
Genome research 18 (4), 571-584, 2008
3452008
Applicability domains for classification problems: benchmarking of distance to models for Ames mutagenicity set
I Sushko, S Novotarskyi, R Körner, AK Pandey, A Cherkasov, J Li, ...
Journal of chemical information and modeling 50 (12), 2094-2111, 2010
2792010
Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery
F Hormozdiari, I Hajirasouliha, P Dao, F Hach, D Yorukoglu, C Alkan, ...
Bioinformatics 26 (12), i350-i357, 2010
2742010
Biomolecular network motif counting and discovery by color coding
N Alon, P Dao, I Hajirasouliha, F Hormozdiari, SC Sahinalp
Bioinformatics 24 (13), i241-i249, 2008
2592008
The structure and evolution of centromeric transition regions within the human genome
X She, JE Horvath, Z Jiang, G Liu, TS Furey, L Christ, R Clark, T Graves, ...
Nature 430 (7002), 857-864, 2004
2282004
The proteogenomic landscape of curable prostate cancer
A Sinha, V Huang, J Livingstone, J Wang, NS Fox, N Kurganovs, ...
Cancer Cell 35 (3), 414-427. e6, 2019
2272019
Analysis of the androgen receptor–regulated lncRNA landscape identifies a role for ARLNC1 in prostate cancer progression
Y Zhang, S Pitchiaya, M Cieślik, YS Niknafs, JCY Tien, Y Hosono, MK Iyer, ...
Nature genetics 50 (6), 814-824, 2018
2202018
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