| Role of Mobile DNA in the Evolution of Vancomycin-Resistant Enterococcus faecalis IT Paulsen, L Banerjei, GSA Myers, KE Nelson, R Seshadri, TD Read, ... Science 299 (5615), 2071-2074, 2003 | 1143 | 2003 |
| Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis JF Heidelberg, IT Paulsen, KE Nelson, EJ Gaidos, WC Nelson, TD Read, ... Nature biotechnology 20 (11), 1118-1123, 2002 | 1079 | 2002 |
| IMG/M v. 5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes IMA Chen, K Chu, K Palaniappan, M Pillay, A Ratner, J Huang, ... Nucleic acids research 47 (D1), D666-D677, 2019 | 867 | 2019 |
| Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5 IT Paulsen, CM Press, J Ravel, DY Kobayashi, GSA Myers, DV Mavrodi, ... Nature biotechnology 23 (7), 873-878, 2005 | 821 | 2005 |
| The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough JF Heidelberg, R Seshadri, SA Haveman, CL Hemme, IT Paulsen, ... Nature biotechnology 22 (5), 554-559, 2004 | 749 | 2004 |
| Complete genome sequence of the Q-fever pathogen Coxiella burnetii R Seshadri, IT Paulsen, JA Eisen, TD Read, KE Nelson, WC Nelson, ... Proceedings of the National Academy of Sciences 100 (9), 5455-5460, 2003 | 730 | 2003 |
| A genomic catalog of Earth’s microbiomes S Nayfach, S Roux, R Seshadri, D Udwary, N Varghese, F Schulz, D Wu, ... Nature biotechnology 39 (4), 499-509, 2021 | 728 | 2021 |
| New insights from uncultivated genomes of the global human gut microbiome S Nayfach, ZJ Shi, R Seshadri, KS Pollard, NC Kyrpides Nature 568 (7753), 505-510, 2019 | 675 | 2019 |
| The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts IT Paulsen, R Seshadri, KE Nelson, JA Eisen, JF Heidelberg, TD Read, ... Proceedings of the National Academy of Sciences 99 (20), 13148-13153, 2002 | 630 | 2002 |
| Comparative genomics of emerging human ehrlichiosis agents JC Dunning Hotopp, M Lin, R Madupu, J Crabtree, SV Angiuoli, J Eisen, ... PLoS genetics 2 (2), e21, 2006 | 589 | 2006 |
| Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes R Seshadri, L Adrian, DE Fouts, JA Eisen, AM Phillippy, BA Methe, ... Science 307 (5706), 105-108, 2005 | 548 | 2005 |
| Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ... Nature biotechnology 36 (4), 359-367, 2018 | 537 | 2018 |
| CAMERA: a community resource for metagenomics R Seshadri, SA Kravitz, L Smarr, P Gilna, M Frazier PLoS biology 5 (3), e75, 2007 | 465 | 2007 |
| Genome Sequence of Aeromonas hydrophila ATCC 7966T: Jack of All Trades R Seshadri, SW Joseph, AK Chopra, J Sha, J Shaw, J Graf, D Haft, M Wu, ... Journal of bacteriology 188 (23), 8272-8282, 2006 | 464 | 2006 |
| The IMG/M data management and analysis system v. 6.0: new tools and advanced capabilities IMA Chen, K Chu, K Palaniappan, A Ratner, J Huang, M Huntemann, ... Nucleic acids research 49 (D1), D751-D763, 2021 | 436 | 2021 |
| Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath) N Ward, Ø Larsen, J Sakwa, L Bruseth, H Khouri, AS Durkin, G Dimitrov, ... PLoS biology 2 (10), e303, 2004 | 417 | 2004 |
| Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens GSA Myers, DA Rasko, JK Cheung, J Ravel, R Seshadri, RT DeBoy, ... Genome research 16 (8), 1031-1040, 2006 | 369 | 2006 |
| Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes R Seshadri, GSA Myers, H Tettelin, JA Eisen, JF Heidelberg, RJ Dodson, ... Proceedings of the National Academy of Sciences 101 (15), 5646-5651, 2004 | 335 | 2004 |
| 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life S Mukherjee, R Seshadri, NJ Varghese, EA Eloe-Fadrosh, ... Nature biotechnology 35 (7), 676-683, 2017 | 268 | 2017 |
| The IMG/M data management and analysis system v. 7: content updates and new features IMA Chen, K Chu, K Palaniappan, A Ratner, J Huang, M Huntemann, ... Nucleic acids research 51 (D1), D723-D732, 2023 | 208 | 2023 |
