Mechanisms of protein search for targets on DNA: theoretical insights AA Shvets, MP Kochugaeva, AB Kolomeisky Molecules 23 (9), 2106, 2018 | 48 | 2018 |
Application of molecular modeling to development of new factor Xa inhibitors VB Sulimov, IV Gribkova, MP Kochugaeva, EV Katkova, AV Sulimov, ... BioMed Research International 2015 (1), 120802, 2015 | 40 | 2015 |
How conformational dynamics influences the protein search for targets on DNA MP Kochugaeva, AA Shvets, AB Kolomeisky Journal of Physics A: Mathematical and Theoretical 49 (44), 444004, 2016 | 28 | 2016 |
Role of static and dynamic obstacles in the protein search for targets on DNA A Shvets, M Kochugaeva, AB Kolomeisky The Journal of Physical Chemistry B 120 (26), 5802-5809, 2016 | 28 | 2016 |
Dynamics of the protein search for targets on DNA in the presence of traps M Lange, M Kochugaeva, AB Kolomeisky The Journal of Physical Chemistry B 119 (38), 12410-12416, 2015 | 28 | 2015 |
Protein search for multiple targets on DNA M Lange, M Kochugaeva, AB Kolomeisky The Journal of chemical physics 143 (10), 2015 | 28 | 2015 |
Elucidating the correlations between cancer initiation times and lifetime cancer risks H Teimouri, MP Kochugaeva, AB Kolomeisky Scientific reports 9 (1), 18940, 2019 | 17 | 2019 |
Optimal length of conformational transition region in protein search for targets on DNA MP Kochugaeva, AM Berezhkovskii, AB Kolomeisky The journal of physical chemistry letters 8 (17), 4049-4054, 2017 | 14 | 2017 |
On the mechanism of homology search by RecA protein filaments MP Kochugaeva, AA Shvets, AB Kolomeisky Biophysical Journal 112 (5), 859-867, 2017 | 14 | 2017 |
PCM, COSMO and Surface GB implementation in program DISOLV: Development and validation VB Sulimov, EV Katkova, IV Oferkin, MP Kochugaeva 244th ACS National Meeting, Philadelphia, Pennsylvania, USA, 2012 | 4 | 2012 |
SARS-CoV-2 leverages airway epithelial protective mechanism for viral infection AM Greaney, MSB Raredon, MP Kochugaeva, LE Niklason, A Levchenko Iscience 26 (3), 2023 | 3 | 2023 |
Kinetics of Protein–DNA Interactions: First-Passage Analysis MP Kochugaeva, AA Shvets, AB Kolomeisky Chemical Kinetics: Beyond the Textbook, 473-492, 2020 | 1 | 2020 |
Interactions: First-Passage Analysis MP Kochugaeva, AA Shvets, AB Kolomeisky Chemical Kinetics: Beyond The Textbook, 473, 2019 | | 2019 |
When will the cancer start? Elucidating the correlations between cancer initiation times and lifetime cancer risks H Teimouri, M Kochugaeva, AB Kolomeisky bioRxiv, 640284, 2019 | | 2019 |
Theoretical investigation of RecA filaments search for DNA breaks M Kochugaeva, A Shvets, A Kolomeisky ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 253, 2017 | | 2017 |
How Conformational Dynamics Influences the Protein Search for Targets on DNA MP Kochugaeva, AA Shvets, AB Kolomeisky Biophysical Journal 112 (3), 314a, 2017 | | 2017 |
Theoretical Investigation of Protein Search for Targets on DNA MP Kochugaeva Rice University, 2017 | | 2017 |
Protein Search for Multiple Targets on DNA M Kochugaeva, M Lange, A Kolomeisky Biophysical Journal 110 (3), 236a, 2016 | | 2016 |
Research Article Application of Molecular Modeling to Development of New Factor Xa Inhibitors VB Sulimov, IV Gribkova, MP Kochugaeva, EV Katkova, AV Sulimov, ... | | 2015 |