| SignalP 5.0 improves signal peptide predictions using deep neural networks JJ Almagro Armenteros, KD Tsirigos, CK Sønderby, TN Petersen, ... Nature biotechnology 37 (4), 420-423, 2019 | 4087 | 2019 |
| Autoencoding beyond pixels using a learned similarity metric ABL Larsen, SK Sønderby, H Larochelle, O Winther International conference on machine learning, 1558-1566, 2016 | 2820 | 2016 |
| SignalP 6.0 predicts all five types of signal peptides using protein language models F Teufel, JJ Almagro Armenteros, AR Johansen, MH Gíslason, SI Pihl, ... Nature biotechnology 40 (7), 1023-1025, 2022 | 1787 | 2022 |
| DeepLoc: prediction of protein subcellular localization using deep learning JJ Almagro Armenteros, CK Sønderby, SK Sønderby, H Nielsen, ... Bioinformatics 33 (21), 3387-3395, 2017 | 1180 | 2017 |
| Ladder variational autoencoders CK Sønderby, T Raiko, L Maaløe, SK Sønderby, O Winther Advances in neural information processing systems 29, 2016 | 1163* | 2016 |
| DeepTMHMM predicts alpha and beta transmembrane proteins using deep neural networks J Hallgren, KD Tsirigos, MD Pedersen, JJ Almagro Armenteros, ... biorxiv, 2022.04. 08.487609, 2022 | 878 | 2022 |
| Detecting sequence signals in targeting peptides using deep learning JJA Armenteros, M Salvatore, O Emanuelsson, O Winther, G Von Heijne, ... Life science alliance 2 (5), 2019 | 874 | 2019 |
| JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update JC Bryne, E Valen, MHE Tang, T Marstrand, O Winther, I da Piedade, ... Nucleic acids research 36 (suppl_1), D102-D106, 2007 | 846 | 2007 |
| NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning MS Klausen, MC Jespersen, H Nielsen, KK Jensen, VI Jurtz, ... Proteins: Structure, Function, and Bioinformatics 87 (6), 520-527, 2019 | 611 | 2019 |
| Auxiliary deep generative models L Maaløe, CK Sønderby, SK Sønderby, O Winther International conference on machine learning, 1445-1453, 2016 | 525 | 2016 |
| Sequential neural models with stochastic layers M Fraccaro, SK Sønderby, U Paquet, O Winther Advances in neural information processing systems 29, 2016 | 491 | 2016 |
| Improved metagenome binning and assembly using deep variational autoencoders JN Nissen, J Johansen, RL Allesøe, CK Sønderby, JJA Armenteros, ... Nature biotechnology 39 (5), 555-560, 2021 | 433 | 2021 |
| The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line Nature genetics 41 (5), 553-562, 2009 | 431 | 2009 |
| DeepLoc 2.0: multi-label subcellular localization prediction using protein language models V Thumuluri, JJ Almagro Armenteros, AR Johansen, H Nielsen, O Winther Nucleic acids research 50 (W1), W228-W234, 2022 | 410 | 2022 |
| A disentangled recognition and nonlinear dynamics model for unsupervised learning M Fraccaro, S Kamronn, U Paquet, O Winther Advances in neural information processing systems 30, 2017 | 370 | 2017 |
| BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis FO Bagger, D Sasivarevic, SH Sohi, LG Laursen, S Pundhir, CK Sønderby, ... Nucleic acids research 44 (D1), D917-D924, 2016 | 338 | 2016 |
| Gaussian processes for classification: Mean-field algorithms M Opper, O Winther Neural computation 12 (11), 2655-2684, 2000 | 334 | 2000 |
| Expectation consistent approximate inference. M Opper, O Winther, MJ Jordan Journal of Machine Learning Research 6 (12), 2005 | 296 | 2005 |
| Bayesian non-negative matrix factorization MN Schmidt, O Winther, LK Hansen International Conference on Independent Component Analysis and Signal …, 2009 | 295 | 2009 |
| Can large language models reason about medical questions? V Liévin, CE Hother, AG Motzfeldt, O Winther Patterns 5 (3), 2024 | 294 | 2024 |
Casper Kaae SønderbyFounder@twig.energy, ML/DL Research ScientistEmail được xác minh tại twig.energy
Søren Kaae SønderbyEmail được xác minh tại twig.energyJosé Juan Almagro ArmenterosPostdoc, Stanford UniversityEmail được xác minh tại stanford.edu
Henrik NielsenAssociate Professor, Department of Health Technology, Technical University of DenmarkEmail được xác minh tại dtu.dk
Lars Kai HansenProfessor, Cognitive Systems, DTU Compute, Technical University of DenmarkEmail được xác minh tại dtu.dk
Lars MaaløeCo-Founder & CTO @ Corti | Adj. Assoc. Professor of Machine Learning @ DTUEmail được xác minh tại corti.ai
Alexander JohansenStanford UniversityEmail được xác minh tại stanford.edu
Søren BrunakProfessor of Disease Systems Biology, University of CopenhagenEmail được xác minh tại cpr.ku.dk
Anders KroghDepartment of Computer Science and Center for Health Data Science, University of CopenhagenEmail được xác minh tại di.ku.dk
Gunnar von HeijneStockholm UniversityEmail được xác minh tại dbb.su.se
Konstantinos Tsirigos, PhD Bioinforma...DTU BiosustainEmail được xác minh tại dtu.dk
Jonas BuskTechnical University of DenmarkEmail được xác minh tại dtu.dk
Nicolas RapindenmarkEmail được xác minh tại ngc.dk
Thomas Nordahl PetersenDTU Food, National Food Institute, DenmarkEmail được xác minh tại food.dtu.dk
paolo marcatiliHead of Antibody Design, Novo NordiskEmail được xác minh tại novonordisk.com
Ricardo HenaoDuke UniversityEmail được xác minh tại duke.edu
Lars Vedel KessingProfessor of Psychiatry, Psychiatric Center Copenhagen and University of Copenhagen, DenmarkEmail được xác minh tại regionh.dk
Valentin LiévinGoogle DeepMindEmail được xác minh tại google.com
