Theo dõi
Meredith Ashby
Meredith Ashby
Caltech, UCSF, Pacific Biosciences
Email được xác minh tại pacificbiosciences.com
Tiêu đề
Trích dẫn bởi
Trích dẫn bởi
Năm
Instability of the transcription factor Foxp3 leads to the generation of pathogenic memory T cells in vivo
X Zhou, SL Bailey-Bucktrout, LT Jeker, C Penaranda, ...
Nature immunology 10 (9), 1000-1007, 2009
15262009
The Genome of the Sea Urchin Strongylocentrotus purpuratus
E Sodergren, GM Weinstock, EH Davidson, RA Cameron, RA Gibbs, ...
Science 314 (5801), 941-952, 2006
12862006
The chemical defensome: environmental sensing and response genes in the Strongylocentrotus purpuratus genome
JV Goldstone, A Hamdoun, BJ Cole, M Howard-Ashby, DW Nebert, ...
Developmental biology 300 (1), 366-384, 2006
3102006
A hybrid approach for the automated finishing of bacterial genomes
A Bashir, AA Klammer, WP Robins, CS Chin, D Webster, E Paxinos, ...
Nature biotechnology 30 (7), 701-707, 2012
2302012
Gene families encoding transcription factors expressed in early development of Strongylocentrotus purpuratus
M Howard-Ashby, SC Materna, CT Brown, L Chen, RA Cameron, ...
Developmental biology 300 (1), 90-107, 2006
1622006
Identification and characterization of homeobox transcription factor genes in Strongylocentrotus purpuratus, and their expression in embryonic development
M Howard-Ashby, SC Materna, CT Brown, L Chen, RA Cameron, ...
Developmental biology 300 (1), 74-89, 2006
1522006
The C2H2 zinc finger genes of Strongylocentrotus purpuratus and their expression in embryonic development
SC Materna, M Howard-Ashby, RF Gray, EH Davidson
Developmental biology 300 (1), 108-120, 2006
1052006
High regulatory gene use in sea urchin embryogenesis: Implications for bilaterian development and evolution
M Howard-Ashby, SC Materna, CT Brown, Q Tu, P Oliveri, RA Cameron, ...
Developmental biology 300 (1), 27-34, 2006
622006
Finding the right fit: evaluation of short-read and long-read sequencing approaches to maximize the utility of clinical microbiome data
JL Gehrig, DM Portik, MD Driscoll, E Jackson, S Chakraborty, D Gratalo, ...
Microbial Genomics 8 (3), 000794, 2022
552022
The complete methylome of Helicobacter pylori UM032
WC Lee, BP Anton, S Wang, P Baybayan, S Singh, M Ashby, EG Chua, ...
BMC genomics 16, 1-9, 2015
502015
Identification of differentially expressed splice variants by the proteogenomic pipeline splicify
MA Komor, TV Pham, AC Hiemstra, SR Piersma, AS Bolijn, T Schelfhorst, ...
Molecular & Cellular Proteomics 16 (10), 1850-1863, 2017
372017
Comparative genomics reveals the diversity of restriction-modification systems and DNA methylation sites in Listeria monocytogenes
P Chen, HC den Bakker, J Korlach, N Kong, DB Storey, EE Paxinos, ...
Applied and environmental microbiology 83 (3), e02091-16, 2017
362017
Draft genome sequences of Burkholderia cenocepacia ET12 lineage strains K56-2 and BC7
JJ Varga, L Losada, AM Zelazny, M Kim, J McCorrison, L Brinkac, ...
Genome Announcements 1 (5), 10.1128/genomea. 00841-13, 2013
342013
C. et al. The genome of the sea urchin Strongylocentrotus purpuratus
SUG Sequencing, E Sodergren, GM Weinstock, EH Davidson, ...
Science 314 (5801), 941-952, 2006
262006
Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia
L Tian, Y Shao, S Nance, J Dang, B Xu, X Ma, Y Li, B Ju, L Dong, ...
Nature communications 10 (1), 2789, 2019
242019
Metagenomic methylation patterns resolve bacterial genomes of unusual size and structural complexity
EG Wilbanks, H Doré, MH Ashby, C Heiner, RJ Roberts, JA Eisen
The ISME Journal 16 (8), 1921-1931, 2022
202022
The complete methylome of
WC Lee, BP Anton, S Wang, P Baybayan, S Singh, M Ashby, EG Chua, ...
Helicobacter pylori, 2015
172015
Comparing the genomes of Helicobacter pylori clinical strain UM032 and Mice-adapted derivatives
Y Khosravi, V Rehvathy, WY Wee, S Wang, P Baybayan, S Singh, ...
Gut pathogens 5, 1-6, 2013
172013
Multiple genome sequences of Helicobacter pylori strains of diverse disease and antibiotic resistance backgrounds from Malaysia
V Rehvathy, MH Tan, SP Gunaletchumy, X Teh, S Wang, P Baybayan, ...
Genome announcements 1 (5), 10.1128/genomea. 00687-13, 2013
162013
Longitudinal, Multi-Platform Metagenomics Yields a High-Quality Genomic Catalog and Guides an In Vitro Model for Cheese Communities
CC Saak, EC Pierce, CB Dinh, D Portik, R Hall, M Ashby, RJ Dutton
Msystems 8 (1), e00701-22, 2023
112023
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