Theo dõi
Mark Akeson
Mark Akeson
Professor of Biomolecular Engineering, UC Santa Cruz
Email được xác minh tại soe.ucsc.edu
Tiêu đề
Trích dẫn bởi
Trích dẫn bởi
Năm
The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community
M Jain, HE Olsen, B Paten, M Akeson
Genome biology 17, 1-11, 2016
18322016
Three decades of nanopore sequencing
D Deamer, M Akeson, D Branton
Nature biotechnology 34 (5), 518-524, 2016
13512016
Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules
M Akeson, D Branton, JJ Kasianowicz, E Brandin, DW Deamer
Biophysical journal 77 (6), 3227-3233, 1999
12951999
Improved data analysis for the MinION nanopore sequencer
M Jain, IT Fiddes, KH Miga, HE Olsen, B Paten, M Akeson
Nature methods 12 (4), 351-356, 2015
8182015
Automated forward and reverse ratcheting of DNA in a nanopore at 5-Å precision
GM Cherf, KR Lieberman, H Rashid, CE Lam, K Karplus, M Akeson
Nature biotechnology 30 (4), 344-348, 2012
7282012
Nanopore native RNA sequencing of a human poly (A) transcriptome
RE Workman, AD Tang, PS Tang, M Jain, JR Tyson, R Razaghi, ...
Nature methods 16 (12), 1297-1305, 2019
6692019
Nanopores and nucleic acids: prospects for ultrarapid sequencing
DW Deamer, M Akeson
Trends in biotechnology 18 (4), 147-151, 2000
6122000
Rapid discrimination among individual DNA hairpin molecules at single-nucleotide resolution using an ion channel
W Vercoutere, S Winters-Hilt, H Olsen, D Deamer, D Haussler, M Akeson
Nature biotechnology 19 (3), 248-252, 2001
5902001
Mapping DNA methylation with high-throughput nanopore sequencing
AC Rand, M Jain, JM Eizenga, A Musselman-Brown, HE Olsen, M Akeson, ...
Nature methods 14 (4), 411-413, 2017
5102017
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
K Shafin, T Pesout, R Lorig-Roach, M Haukness, HE Olsen, C Bosworth, ...
Nature biotechnology 38 (9), 1044-1053, 2020
4872020
Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells
A Byrne, AE Beaudin, HE Olsen, M Jain, C Cole, T Palmer, RM DuBois, ...
Nature communications 8 (1), 16027, 2017
4282017
Unfoldase-mediated protein translocation through an α-hemolysin nanopore
J Nivala, DB Marks, M Akeson
Nature biotechnology 31 (3), 247-250, 2013
4072013
Single-molecule analysis of DNA-protein complexes using nanopores
B Hornblower, A Coombs, RD Whitaker, A Kolomeisky, SJ Picone, ...
Nature methods 4 (4), 315-317, 2007
3762007
Processive replication of single DNA molecules in a nanopore catalyzed by phi29 DNA polymerase
KR Lieberman, GM Cherf, MJ Doody, F Olasagasti, Y Kolodji, M Akeson
Journal of the American Chemical Society 132 (50), 17961-17972, 2010
3312010
Sequence-specific detection of individual DNA polymerase complexes in real time using a nanopore
S Benner, RJA Chen, NA Wilson, R Abu-Shumays, N Hurt, KR Lieberman, ...
Nature nanotechnology 2 (11), 718-724, 2007
3072007
Linear assembly of a human centromere on the Y chromosome
M Jain, HE Olsen, DJ Turner, D Stoddart, KV Bulazel, B Paten, D Haussler, ...
Nature biotechnology 36 (4), 321-323, 2018
2562018
Nanopore sensors for nucleic acid analysis
JJ Nakane, M Akeson, A Marziali
Journal of Physics: Condensed Matter 15 (32), R1365, 2003
2312003
Replication of individual DNA molecules under electronic control using a protein nanopore
F Olasagasti, KR Lieberman, S Benner, GM Cherf, JM Dahl, DW Deamer, ...
Nature nanotechnology 5 (11), 798-806, 2010
2242010
Error rates for nanopore discrimination among cytosine, methylcytosine, and hydroxymethylcytosine along individual DNA strands
J Schreiber, ZL Wescoe, R Abu-Shumays, JT Vivian, B Baatar, K Karplus, ...
Proceedings of the National Academy of Sciences 110 (47), 18910-18915, 2013
2212013
New DNA sequencing methods
A Marziali, M Akeson
Annual review of biomedical engineering 3 (1), 195-223, 2001
2132001
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