Theo dõi
Jose Rodriguez
Jose Rodriguez
Cardiovascular Proteomics, Spanish National Center for Cardiovascular Research (CNIC)
Email được xác minh tại cnic.es
Tiêu đề
Trích dẫn bởi
Trích dẫn bởi
Năm
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
175942012
GENCODE: the reference human genome annotation for The ENCODE Project
J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ...
Genome research 22 (9), 1760-1774, 2012
54542012
Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
15842020
A user's guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS biology 9 (4), e1001046, 2011
14992011
Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes
I Ezkurdia, D Juan, JM Rodriguez, A Frankish, M Diekhans, J Harrow, ...
Human molecular genetics 23 (22), 5866-5878, 2014
8002014
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20, 1-23, 2019
4452019
APPRIS: annotation of principal and alternative splice isoforms
JM Rodriguez, P Maietta, I Ezkurdia, A Pietrelli, JJ Wesselink, G Lopez, ...
Nucleic acids research 41 (D1), D110-D117, 2013
2582013
Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx
F Abascal, A Corvelo, F Cruz, JL Villanueva-Cañas, A Vlasova, ...
Genome biology 17, 1-19, 2016
1902016
APPRIS 2017: principal isoforms for multiple gene sets
JM Rodriguez, J Rodriguez-Rivas, T Di Domenico, J Vázquez, A Valencia, ...
Nucleic acids research 46 (D1), D213-D217, 2018
1472018
Most highly expressed protein-coding genes have a single dominant isoform
I Ezkurdia, JM Rodriguez, E Carrillo-de Santa Pau, J Vázquez, A Valencia, ...
Journal of proteome research 14 (4), 1880-1887, 2015
1342015
Interoperability with Moby 1.0-it's better than sharing your toothbrush!
M Wilkinson
Nature Precedings, 1-1, 2008
1282008
Comparative proteomics reveals a significant bias toward alternative protein isoforms with conserved structure and function
I Ezkurdia, A del Pozo, A Frankish, JM Rodriguez, J Harrow, K Ashman, ...
Molecular biology and evolution 29 (9), 2265-2283, 2012
1062012
De Novo Assembly and Functional Annotation of the Olive (Olea europaea) Transcriptome
A Munoz-Mérida, JJ González-Plaza, A Canada, ANAM Blanco, ...
DNA research 20 (1), 93-108, 2013
1042013
Alternatively spliced homologous exons have ancient origins and are highly expressed at the protein level
F Abascal, I Ezkurdia, J Rodriguez-Rivas, JM Rodriguez, A del Pozo, ...
PLoS computational biology 11 (6), e1004325, 2015
992015
Perspectives on ENCODE
MP Snyder, TR Gingeras, JE Moore, Z Weng, MB Gerstein, B Ren, ...
Nature 583 (7818), 693-698, 2020
972020
PanDrugs: a novel method to prioritize anticancer drug treatments according to individual genomic data
E Piñeiro-Yáñez, M Reboiro-Jato, G Gómez-López, J Perales-Patón, ...
Genome medicine 10, 1-11, 2018
862018
Guías de diagnóstico y tratamiento de diabetes gestacional. ALAD 2016
S Salzberg, SG de Lapertosa, E Falcón
Revista de la Sociedad Argentina de Diabetes 50 (3), 117-128, 2016
862016
Loose ends: almost one in five human genes still have unresolved coding status
F Abascal, D Juan, I Jungreis, L Martinez, M Rigau, JM Rodriguez, ...
Nucleic acids research 46 (14), 7070-7084, 2018
782018
An analysis of tissue-specific alternative splicing at the protein level
JM Rodriguez, F Pozo, T Di Domenico, J Vazquez, ML Tress
PLoS Computational Biology 16 (10), e1008287, 2020
772020
SanXoT: a modular and versatile package for the quantitative analysis of high-throughput proteomics experiments
M Trevisan-Herraz, N Bagwan, F García-Marqués, JM Rodriguez, I Jorge, ...
Bioinformatics 35 (9), 1594-1596, 2019
642019
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