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Andrey V. Bzikadze
Andrey V. Bzikadze
Amazon
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Alıntı yapanlar
Alıntı yapanlar
Yıl
The complete sequence of a human genome
S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ...
Science 376 (6588), 44-53, 2022
26572022
Telomere-to-telomere assembly of a complete human X chromosome
KH Miga, S Koren, A Rhie, MR Vollger, A Gershman, A Bzikadze, ...
Nature 585 (7823), 79-84, 2020
7782020
Complete genomic and epigenetic maps of human centromeres
N Altemose, GA Logsdon, AV Bzikadze, P Sidhwani, SA Langley, ...
Science 376 (6588), eabl4178, 2022
3932022
The structure, function and evolution of a complete human chromosome 8
GA Logsdon, MR Vollger, PH Hsieh, Y Mao, MA Liskovykh, S Koren, ...
Nature, 1-7, 2021
3052021
The complete sequence of a human Y chromosome
A Rhie, S Nurk, M Cechova, SJ Hoyt, DJ Taylor, N Altemose, PW Hook, ...
Nature 621 (7978), 344-354, 2023
2762023
Multiplex de Bruijn graphs enable genome assembly from long, high-fidelity reads
A Bankevich, AV Bzikadze, M Kolmogorov, D Antipov, PA Pevzner
Nature biotechnology 40 (7), 1075-1081, 2022
932022
Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies
AM Mc Cartney, K Shafin, M Alonge, AV Bzikadze, G Formenti, ...
Nature methods 19 (6), 687-695, 2022
862022
Automated assembly of centromeres from ultra-long error-prone reads
AV Bzikadze, PA Pevzner
Nature Biotechnology 38 (11), 1309-1316, 2020
80*2020
TandemTools: mapping long reads and assessing/improving assembly quality in extra-long tandem repeats
A Mikheenko, AV Bzikadze, A Gurevich, KH Miga, PA Pevzner
Bioinformatics 36 (Supplement_1), i75-i83, 2020
59*2020
Reconstructing antibody repertoires from error-prone immunosequencing reads
A Shlemov, S Bankevich, A Bzikadze, MA Turchaninova, Y Safonova, ...
The Journal of Immunology 199 (9), 3369-3380, 2017
462017
The string decomposition problem and its applications to centromere analysis and assembly
T Dvorkina, AV Bzikadze, PA Pevzner
Bioinformatics 36 (Supplement_1), i93-i101, 2020
372020
Automated annotation of human centromeres with HORmon
O Kunyavskaya, T Dvorkina, AV Bzikadze, I Alexandrov, PA Pevzner
Genome Research, gr. 276362.121, 2022
25*2022
CentromereArchitect: inference and analysis of the architecture of centromeres
T Dvorkina, O Kunyavskaya, AV Bzikadze, I Alexandrov, PA Pevzner
Bioinformatics 37 (Supplement_1), i196-i204, 2021
242021
UniAligner: a parameter-free framework for fast sequence alignment
AV Bzikadze, PA Pevzner
Nature Methods 20 (9), 1346-1354, 2023
162023
Fast and accurate mapping of long reads to complete genome assemblies with VerityMap
AV Bzikadze, A Mikheenko, PA Pevzner
Genome Research 32 (11-12), 2107-2118, 2022
122022
A scalable model for simulating multi-round antibody evolution and benchmarking of clonal tree reconstruction methods
C Zhang, AV Bzikadze, Y Safonova, S Mirarab
Frontiers in immunology 13, 1014439, 2022
8*2022
Assembling long accurate reads using de Bruijn graphs
A Bankevich, A Bzikadze, M Kolmogorov, D Antipov, PA Pevzner
bioRxiv, 2020
22020
Reconstructing antibody repertoires from error-prone immunosequencing datasets
A Shlemov, S Bankevich, A Bzikadze, MA Turchaninova, Y Safonova, ...
Research in Computational Molecular Biology, 396, 0
2
On some statistical properties of the “Book Stack” transformation
AV Bzikadze, VV Nekrutkin
Vestnik St. Petersburg University: Mathematics 49, 305-312, 2016
12016
A complete reference genome improves short-read analysis of human genetic variation
CHM over GRCh38, S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, ...
GENOMIC VARIANT CALLING AT SCALE ACROSS HUMAN POPULATIONS, 57, 2023
2023
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