Kamu erişimi zorunlu olan makaleler - T. M. MuraliDaha fazla bilgi edinin
Bir yerde sunuluyor: 47
Benchmarking algorithms for gene regulatory network inference from single-cell transcriptomic data
A Pratapa, AP Jalihal, JN Law, A Bharadwaj, TM Murali
Nature methods 17 (2), 147-154, 2020
Zorunlu olanlar: US National Science Foundation, US Department of Defense, US National …
The human-bacterial pathogen protein interaction networks of Bacillus anthracis, Francisella tularensis, and Yersinia pestis
MD Dyer, C Neff, M Dufford, CG Rivera, D Shattuck, J Bassaganya-Riera, ...
PloS one 5 (8), e12089, 2010
Zorunlu olanlar: US National Institutes of Health
Atomic level computational identification of ligand migration pathways between solvent and binding site in myoglobin
JZ Ruscio, D Kumar, M Shukla, MG Prisant, TM Murali, AV Onufriev
Proceedings of the National Academy of Sciences 105 (27), 9204-9209, 2008
Zorunlu olanlar: US National Institutes of Health
Generalisable long COVID subtypes: findings from the NIH N3C and RECOVER programmes
JT Reese, H Blau, E Casiraghi, T Bergquist, JJ Loomba, TJ Callahan, ...
EBioMedicine 87, 2023
Zorunlu olanlar: US Department of Energy, Bill & Melinda Gates Foundation, US National …
Supervised learning and prediction of physical interactions between human and HIV proteins
MD Dyer, TM Murali, BW Sobral
Infection, Genetics and Evolution 11 (5), 917-923, 2011
Zorunlu olanlar: US National Institutes of Health
From START to FINISH: computational analysis of cell cycle control in budding yeast
P Kraikivski, KC Chen, T Laomettachit, TM Murali, JJ Tyson
NPJ systems biology and applications 1 (1), 1-9, 2015
Zorunlu olanlar: US National Institutes of Health
Signaling hypergraphs
A Ritz, AN Tegge, H Kim, CL Poirel, TM Murali
Trends in biotechnology 32 (7), 356-362, 2014
Zorunlu olanlar: US National Institutes of Health
PIG—the pathogen interaction gateway
T Driscoll, MD Dyer, TM Murali, BW Sobral
Nucleic acids research 37 (suppl_1), D647-D650, 2009
Zorunlu olanlar: US National Institutes of Health
Pathways on demand: automated reconstruction of human signaling networks
A Ritz, CL Poirel, AN Tegge, N Sharp, K Simmons, A Powell, SD Kale, ...
NPJ systems biology and applications 2 (1), 1-9, 2016
Zorunlu olanlar: US National Science Foundation, US National Institutes of Health
Network-based prediction and analysis of HIV dependency factors
TM Murali, MD Dyer, D Badger, BM Tyler, MG Katze
PLoS computational biology 7 (9), e1002164, 2011
Zorunlu olanlar: US National Institutes of Health
Designing a multicellular organotypic 3D liver model with a detachable, nanoscale polymeric Space of Disse
AL Larkin, RR Rodrigues, TM Murali, P Rajagopalan
Tissue Engineering Part C: Methods 19 (11), 875-884, 2013
Zorunlu olanlar: US National Institutes of Health
Gene regulatory network inference in single-cell biology
K Akers, TM Murali
Current Opinion in Systems Biology 26, 87-97, 2021
Zorunlu olanlar: US National Science Foundation
Pathway analysis with signaling hypergraphs
A Ritz, TM Murali
Proceedings of the 5th ACM Conference on Bioinformatics, Computational …, 2014
Zorunlu olanlar: US National Institutes of Health
A comparative study of genome-wide transcriptional profiles of primary hepatocytes in collagen sandwich and monolayer cultures
Y Kim, CD Lasher, LM Milford, TM Murali, P Rajagopalan
Tissue Engineering Part C: Methods 16 (6), 1449-1460, 2010
Zorunlu olanlar: US National Institutes of Health
The PathLinker app: Connect the dots in protein interaction networks
DP Gil, JN Law, TM Murali
F1000Research 6, 58, 2017
Zorunlu olanlar: US National Science Foundation, US National Institutes of Health
XTalkDB: a database of signaling pathway crosstalk
SA Sam, J Teel, AN Tegge, A Bharadwaj, TM Murali
Nucleic acids research 45 (D1), D432-D439, 2017
Zorunlu olanlar: US National Science Foundation, US National Institutes of Health
Hypergraph-based connectivity measures for signaling pathway topologies
N Franzese, A Groce, TM Murali, A Ritz
PLoS computational biology 15 (10), e1007384, 2019
Zorunlu olanlar: US National Science Foundation
Experimental testing of a new integrated model of the budding yeast Start transition
NR Adames, PL Schuck, KC Chen, TM Murali, JJ Tyson, J Peccoud
Molecular biology of the cell 26 (22), 3966-3984, 2015
Zorunlu olanlar: US National Institutes of Health
Current and future directions in network biology
M Zitnik, MM Li, A Wells, K Glass, D Morselli Gysi, A Krishnan, TM Murali, ...
Bioinformatics advances 4 (1), vbae099, 2024
Zorunlu olanlar: US National Science Foundation, US Department of Energy, US National …
Xtalk: a path-based approach for identifying crosstalk between signaling pathways
AN Tegge, N Sharp, TM Murali
Bioinformatics 32 (2), 242-251, 2016
Zorunlu olanlar: US National Science Foundation, US National Institutes of Health
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