Entry of human papillomavirus type 16 by actin-dependent, clathrin-and lipid raft-independent endocytosis M Schelhaas, B Shah, M Holzer, P Blattmann, L Kühling, PM Day, ... PLoS pathogens 8 (4), e1002657, 2012 | 366 | 2012 |
Human SRMAtlas: a resource of targeted assays to quantify the complete human proteome U Kusebauch, DS Campbell, EW Deutsch, CS Chu, DA Spicer, ... Cell 166 (3), 766-778, 2016 | 342 | 2016 |
Systems proteomics of liver mitochondria function EG Williams, Y Wu, P Jha, S Dubuis, P Blattmann, CA Argmann, ... Science 352 (6291), aad0189, 2016 | 328 | 2016 |
High‐throughput proteomic analysis of FFPE tissue samples facilitates tumor stratification Y Zhu, T Weiss, Q Zhang, R Sun, B Wang, X Yi, Z Wu, H Gao, X Cai, ... Molecular oncology 13 (11), 2305-2328, 2019 | 145 | 2019 |
Quantitative interactomics in primary T cells provides a rationale for concomitant PD-1 and BTLA coinhibitor blockade in cancer immunotherapy J Celis-Gutierrez, P Blattmann, Y Zhai, N Jarmuzynski, K Ruminski, ... Cell reports 27 (11), 3315-3330. e7, 2019 | 139 | 2019 |
Characterization of drug‐induced transcriptional modules: towards drug repositioning and functional understanding M Iskar, G Zeller, P Blattmann, M Campillos, M Kuhn, KH Kaminska, ... Molecular systems biology 9 (1), 662, 2013 | 137 | 2013 |
Influenza A virus infection of human primary dendritic cells impairs their ability to cross-present antigen to CD8 T cells A Smed-Sörensen, C Chalouni, B Chatterjee, L Cohn, P Blattmann, ... PLoS pathogens 8 (3), e1002572, 2012 | 120 | 2012 |
Systematic Cell-Based Phenotyping of Missense Alleles Empowers Rare Variant Association Studies: A Case for LDLR and Myocardial Infarction AS Thormaehlen, C Schuberth, HH Won, P Blattmann, ... PLoS genetics 11 (2), e1004855, 2015 | 67 | 2015 |
RNAi–based functional profiling of loci from blood lipid genome-wide association studies identifies genes with cholesterol-regulatory function P Blattmann, C Schuberth, R Pepperkok, H Runz PLoS genetics 9 (2), e1003338, 2013 | 67 | 2013 |
Generation of a zebrafish SWATH-MS spectral library to quantify 10,000 proteins P Blattmann, V Stutz, G Lizzo, J Richard, P Gut, R Aebersold Scientific Data 6 (1), 1-11, 2019 | 53 | 2019 |
SWATH2stats: an R/bioconductor package to process and convert quantitative SWATH-MS proteomics data for downstream analysis tools P Blattmann, M Heusel, R Aebersold PloS one 11 (4), e0153160, 2016 | 53 | 2016 |
Similarities and differences of blood N-glycoproteins in five solid carcinomas at localized clinical stage analyzed by SWATH-MS T Sajic, Y Liu, E Arvaniti, S Surinova, EG Williams, R Schiess, ... Cell reports 23 (9), 2819-2831. e5, 2018 | 47 | 2018 |
Systematic characterization of pan‐cancer mutation clusters M Buljan, P Blattmann, R Aebersold, M Boutros Molecular Systems Biology 14 (3), e7974, 2018 | 47 | 2018 |
Systems pharmacology dissection of cholesterol regulation reveals determinants of large pharmacodynamic variability between cell lines P Blattmann, D Henriques, M Zimmermann, F Frommelt, U Sauer, ... Cell systems 5 (6), 604-619. e7, 2017 | 24 | 2017 |
NF-κB drives epithelial-mesenchymal mechanisms of lung fibrosis in a translational lung cell model P Sieber, A Schäfer, R Lieberherr, SL Caimi, U Lüthi, J Ryge, ... JCI insight 8 (3), e154719, 2023 | 21 | 2023 |
Quantitative proteomic landscapes of primary and recurrent glioblastoma reveal a protumorigeneic role for FBXO2-dependent glioma-microenvironment interactions M Buehler, X Yi, W Ge, P Blattmann, E Rushing, G Reifenberger, ... Neuro-oncology 25 (2), 290-302, 2023 | 16 | 2023 |
Functional and spatial proteomics profiling reveals intra-and intercellular signaling crosstalk in colorectal cancer C Plattner, G Lamberti, P Blattmann, A Kirchmair, D Rieder, Z Loncova, ... Iscience 26 (12), 2023 | 9 | 2023 |
Pairwise effects between lipid GWAS genes modulate lipid plasma levels and cellular uptake M Zimoń, Y Huang, A Trasta, A Halavatyi, JZ Liu, CY Chen, P Blattmann, ... Nature communications 12 (1), 6411, 2021 | 8 | 2021 |
A computational framework for the inference of protein complex remodeling from whole-proteome measurements M Buljan, A Banaei-Esfahani, P Blattmann, F Meier-Abt, W Shao, O Vitek, ... Nature Methods 20 (10), 1523-1529, 2023 | 7 | 2023 |
The Advent of Mass Spectrometry-Based Proteomics in Systems Biology Research P Blattmann, R Aebersold Encyclopedia of Cell Biology 4, 166-176, 2016 | 5 | 2016 |