| The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance H Tegally, JE San, M Cotten, M Moir, B Tegomoh, G Mboowa, DP Martin, ... Science 378 (6615), eabq5358, 2022 | 123 | 2022 |
| ThermoMutDB: a thermodynamic database for missense mutations JS Xavier, TB Nguyen, M Karmarkar, S Portelli, PM Rezende, JPL Velloso, ... Nucleic acids research 49 (D1), D475-D479, 2021 | 87 | 2021 |
| Dispersal patterns and influence of air travel during the global expansion of SARS-CoV-2 variants of concern H Tegally, E Wilkinson, JLH Tsui, M Moir, D Martin, AF Brito, M Giovanetti, ... Cell 186 (15), 3277-3290. e16, 2023 | 49* | 2023 |
| EasyVS: a user-friendly web-based tool for molecule library selection and structure-based virtual screening DEV Pires, WNP Veloso, YC Myung, CHM Rodrigues, M Silk, ... Bioinformatics 36 (14), 4200-4202, 2020 | 29 | 2020 |
| Understanding the popularity of reporters and assignees in the Github. J Xavier, A Macedo, M de Almeida Maia SEKE, 484-489, 2014 | 28 | 2014 |
| SARS-CoV-2 Africa dashboard for real-time COVID-19 information JS Xavier, M Moir, H Tegally, N Sitharam, W Abdool Karim, JE San, ... Nature microbiology 8 (1), 1-4, 2023 | 12 | 2023 |
| A survey on research in software reliability engineering in the last decade J Xavier, A Macêdo, R Matias, L Borges Proceedings of the 29th Annual ACM Symposium on Applied Computing, 1190-1191, 2014 | 11 | 2014 |
| Evaluating hierarchical machine learning approaches to classify biological databases PM Rezende, JS Xavier, DB Ascher, GR Fernandes, DEV Pires Briefings in bioinformatics 23 (4), bbac216, 2022 | 10 | 2022 |
| Genomic epidemiology of SARS-CoV-2 during the first four waves in Mozambique N Ismael, S van Wyk, H Tegally, J Giandhari, JE San, M Moir, S Pillay, ... PLOS Global Public Health 3 (3), e0001593, 2023 | 8 | 2023 |
| Exploring protein supersecondary structure through changes in protein folding, stability, and flexibility DEV Pires, CHM Rodrigues, ATS Albanaz, M Karmakar, Y Myung, ... Protein supersecondary structures: methods and protocols, 173-185, 2019 | 6 | 2019 |
| From in-person to the online world: insights into organizing events in bioinformatics AL da Silva, AP Abreu, D Mariano, F Caixeta, FB Santos, FSD Lage, ... Frontiers in Bioinformatics 1, 711463, 2021 | 5 | 2021 |
| Identifying Genotype–Phenotype Correlations via Integrative Mutation Analysis E Airey, S Portelli, JS Xavier, YC Myung, M Silk, M Karmakar, JPL Velloso, ... Artificial Neural Networks, 1-32, 2021 | 5 | 2021 |
| A comprehensive computational platform to guide drug development using graph-based signature methods DEV Pires, S Portelli, PM Rezende, WNP Veloso, JS Xavier, M Karmakar, ... Structural Bioinformatics: Methods and Protocols, 91-106, 2020 | 5 | 2020 |
| BIOINFO–Revista Brasileira de Bioinformática e Biologia Computacional D Mariano, FZ Dezordi, P Martins, J Xavier, T de Jesus Sousa, L Lima, ... Alfahelix Publicações, 2021 | 4 | 2021 |
| Código X em Casa: um relato de experiência sobre o ensino remoto de computação desplugada para meninas em situação de vulnerabilidade socioeconômica, em tempos de … LA Figueiredo, ABA Dias, LAG Fagundes, V de Paula Silva, SGM Almeida, ... Workshop de Informática na Escola (WIE), 279-288, 2020 | 4 | 2020 |
| Insights into SARS‐CoV‐2 in Angola during the COVID‐19 peak: Molecular epidemiology and genome surveillance NM Francisco, S Van Wyk, M Moir, JE San, CS Sebastião, H Tegally, ... Influenza and Other Respiratory Viruses 17 (9), e13198, 2023 | 3 | 2023 |
| Managing and assembling population-scale data streams, tools and workflows to plan for future pandemics within the INFORM-Africa Consortium J Poongavanan, J Xavier, M Dunaiski, H Tegally, SO Oladejo, O Ayorinde, ... South African journal of science 119 (5-6), 1-4, 2023 | 3 | 2023 |
| SARS-CoV-2 Genomic Epidemiology Dashboards: A Review of Functionality and Technological Frameworks for the Public Health Response N Sitharam, H Tegally, DC Silva, C Baxter, T de Oliveira, JS Xavier Genes 15 (7), 876, 2024 | 2 | 2024 |
| AS MÁQUINAS PODEM PENSAR? J Xavier BIOINFO–revista brasileira de bioinformática e biologia computacional 221, 2021 | 1 | 2021 |
| Craft: A Machine Learning Approach to Dengue Subtyping DJ van Zyl, M Dunaiski, H Tegally, C Baxter, T de Oliveira, JS Xavier, ... bioRxiv, 2025.02. 10.637410, 2025 | | 2025 |
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