Jonathan Cooper

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David GavaghanProfessor of Computational Biology, University of OxfordVerifierad e-postadress på cs.ox.ac.uk
Gary MiramsCentre for Mathematical Medicine & Biology, University of NottinghamVerifierad e-postadress på nottingham.ac.uk
Joe Pitt-FrancisUniversity of Oxford, Department of Computer ScienceVerifierad e-postadress på cs.ox.ac.uk
Miguel O. BernabeuProfessor of Computational Medicine, The University of EdinburghVerifierad e-postadress på ed.ac.uk
Pras PathmanathanFood and Drug AdministrationVerifierad e-postadress på fda.hhs.gov
Alan GarnyAuckland Bioengineering Institute, University of AucklandVerifierad e-postadress på auckland.ac.nz
James OsborneUniversity of MelbourneVerifierad e-postadress på unimelb.edu.au
Alexander G FletcherUniversity of SheffieldVerifierad e-postadress på sheffield.ac.uk
David Phillip NickersonAuckland Bioengineering Institute, University of AucklandVerifierad e-postadress på auckland.ac.nz
Rafel BordasFirst Light Fusion LtdVerifierad e-postadress på firstlightfusion.com
Helen ByrneUniversity of OxfordVerifierad e-postadress på maths.ox.ac.uk
Philip MainiProfessor of Mathematical BiologyVerifierad e-postadress på maths.ox.ac.uk
Steve McKeeverAssociate Professor, Uppsala UniversityVerifierad e-postadress på im.uu.se
Dagmar WaltemathProfessor of Medical InformaticsVerifierad e-postadress på uni-greifswald.de
Blanca RodriguezUniversity of OxfordVerifierad e-postadress på cs.ox.ac.uk
Frank T. BergmannBioQUANT/COS, Heidelberg University, Heidelberg, GermanyVerifierad e-postadress på caltech.edu
James SouthernSGIVerifierad e-postadress på sgi.com
Poul NielsenProfessor, Engineering Science and Auckland Bioengineering Institute, University of AucklandVerifierad e-postadress på auckland.ac.nz
Michael HuckaGoogle Quantum AIVerifierad e-postadress på google.com
Denis NobleEmeritus Professor of Cardiovascular Physiology, Oxford UniversityVerifierad e-postadress på dpag.ox.ac.uk

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Jonathan Cooper

University College London

Verifierad e-postadress på ucl.ac.uk - Startsida

Research Software Engineering Computational Biology


Titel Sortera efter citat Sortera efter år Sortera efter titel	Citeras av Citeras av	År
Chaste: An Open Source C++ Library for Computational Physiology and Biology GR Mirams, CJ Arthurs, MO Bernabeu, R Bordas, J Cooper, A Corrias, ... PLoS Computational Biology 9 (3), 2013	526	2013
Simulation of multiple ion channel block provides improved early prediction of compounds’ clinical torsadogenic risk GR Mirams, Y Cui, A Sher, M Fink, J Cooper, BM Heath, NC McMahon, ... Cardiovascular research 91 (1), 53-61, 2011	341	2011
Chaste: a test-driven approach to software development for biological modelling J Pitt-Francis, P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, ... Computer Physics Communications 180 (12), 2452-2471, 2009	311	2009
An integrative computational model for intestinal tissue renewal IMM Van Leeuwen, GR Mirams, A Walter, A Fletcher, P Murray, J Osborne, ... Cell proliferation 42 (5), 617-636, 2009	191*	2009
CellML and associated tools and techniques A Garny, DP Nickerson, J Cooper, RW Santos, AK Miller, S McKeever, ... Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2008	178	2008
Minimum Information About a Simulation Experiment (MIASE) D Waltemath, R Adams, DA Beard, FT Bergmann, US Bhalla, R Britten, ... PLoS Computational Biology 7 (4), e1001122, 2011	173	2011
COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project FT Bergmann, R Adams, S Moodie, J Cooper, M Glont, M Golebiewski, ... BMC bioinformatics 15 (1), 369, 2014	169	2014
A computational study of discrete mechanical tissue models P Pathmanathan, J Cooper, A Fletcher, G Mirams, P Murray, J Osborne, ... Physical biology 6, 036001, 2009	149	2009
Computational assessment of drug‐induced effects on the electrocardiogram: from ion channel to body surface potentials N Zemzemi, MO Bernabeu, J Saiz, J Cooper, P Pathmanathan, ... British Journal of Pharmacology 168 (3), 718-733, 2013	129	2013
Chaste: using agile programming techniques to develop computational biology software J Pitt-Francis, MO Bernabeu, J Cooper, A Garny, L Momtahan, J Osborne, ... Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2008	111	2008
A numerical guide to the solution of the bidomain equations of cardiac electrophysiology P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, A Garny, ... Progress in biophysics and molecular biology 102 (2-3), 136-155, 2010	106	2010
An overview of the CellML API and its implementation A Miller, J Marsh, A Reeve, A Garny, R Britten, M Halstead, J Cooper, ... BMC bioinformatics 11 (1), 178, 2010	95	2010
Promoting coordinated development of community-based information standards for modeling in biology: the COMBINE initiative M Hucka, DP Nickerson, GD Bader, FT Bergmann, J Cooper, E Demir, ... Frontiers in Bioengineering and Biotechnology 3, 2015	92	2015
Chaste: Cancer, Heart and Soft Tissue Environment F Cooper, R Baker, M Bernabeu, R Bordas, L Bowler, A Bueno-Orovio, ... Journal of Open Source Software 5 (47), 1848, 2020	78	2020
Ten simple rules for a successful cross-disciplinary collaboration B Knapp, R Bardenet, MO Bernabeu, R Bordas, M Bruna, B Calderhead, ... PLoS computational biology 11 (4), e1004214, 2015	73	2015
The Cardiac Electrophysiology Web Lab J Cooper, M Scharm, GR Mirams Biophysical Journal 110 (2), 292-300, 2016	69	2016
High-throughput functional curation of cellular electrophysiology models J Cooper, GR Mirams, SA Niederer Progress in biophysics and molecular biology 107 (1), 11-20, 2011	65	2011
Ten simple rules for effective computational research JM Osborne, MO Bernabeu, M Bruna, B Calderhead, J Cooper, ... PLoS Comput Biol 10 (3), e1003506, 2014	62	2014
A call for virtual experiments: accelerating the scientific process J Cooper, JO Vik, D Waltemath Progress in biophysics and molecular biology 117 (1), 99-106, 2015	58	2015
Chaste: incorporating a novel multi-scale spatial and temporal algorithm into a large-scale open source library MO Bernabeu, R Bordas, P Pathmanathan, J Pitt-Francis, J Cooper, ... Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2009	50	2009

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