Serafim Batzoglou

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Chuong B. DoVerifierad e-postadress på cs.stanford.edu
Michael BrudnoProfessor of Computer Science, University of Toronto; Chief Data Scientist, UHNVerifierad e-postadress på cs.toronto.edu
Michael SnyderStanford UniversityVerifierad e-postadress på stanford.edu
Greg CooperFaculty Investigator, HudsonAlpha Institute for BiotechnologyVerifierad e-postadress på hudsonalpha.org
Bo WangChief AI Scientist,UHN; CIFAR AI Chair, Vector Institute; Assistant Professor, U of TorontoVerifierad e-postadress på vectorinstitute.ai
Eugene DavydovGoogleVerifierad e-postadress på google.com
Anshul KundajeAssociate Professor, Dept. of Genetics, Dept. of Computer Science, Stanford UniversityVerifierad e-postadress på stanford.edu
Sofia Kyriazopoulou PanagiotopoulouArsenalBio, Illumina, 10x Genomics, Stanford University Department of Computer ScienceVerifierad e-postadress på alumni.stanford.edu
Marina SirotaProfessor, Acting Director, Bakar Computational Health Sciences Institute, UCSFVerifierad e-postadress på ucsf.edu
Victoria PopicStanford University, MITVerifierad e-postadress på stanford.edu
Inna DubchakSenior Scientist, Lawrence Berkeley National Laboratory, USAVerifierad e-postadress på lbl.gov
Junjie ZhuApple Inc.Verifierad e-postadress på stanford.edu
Raheleh SalariVerifierad e-postadress på cs.stanford.edu
Richard M. MyersHudsonAlpha Institute for BiotechnologyVerifierad e-postadress på hudsonalpha.com
Daniele RamazzottiDepartment of Medicine and Surgery, University of Milano-Bicocca, Milano, ItalyVerifierad e-postadress på unimib.it
Lior PachterBren Professor of Computational Biology, CaltechVerifierad e-postadress på caltech.edu
Daniel NewburgerGraduate Student in Biomedical Informatics, Stanford UniversityVerifierad e-postadress på stanford.edu
Lin HuangStanford University, The Chinese University of Hong KongVerifierad e-postadress på cs.stanford.edu
Emma PiersonCornell TechVerifierad e-postadress på cornell.edu
Alan P BoyleAssociate Professor, University of MichiganVerifierad e-postadress på umich.edu

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Serafim Batzoglou

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Computational Genomics AI


Titel Sortera efter citat Sortera efter år Sortera efter titel	Citeras av Citeras av	År
Initial sequencing and analysis of the human genome US DOE Joint Genome Institute: Hawkins Trevor 4 Branscomb Elbert 4 Predki ... Nature 409 (6822), 860-921, 2001	25049	2001
An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012	17187	2012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ... nature 447 (7146), 799-816, 2007	6099	2007
Genome sequence of the Brown Norway rat yields insights into mammalian evolution University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ... Nature 428 (6982), 493-521, 2004	2568	2004
The ENCODE(ENCyclopedia Of DNA Elements) Project EA Feingold, PJ Good, MS Guyer, S Kamholz, L Liefer, K Wetterstrand, ... Science(Washington) 306 (5696), 636-40, 2004	2437	2004
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, ... Genome research 22 (9), 1813-1831, 2012	2313	2012
Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-18, 2007	2266	2007
Identifying a high fraction of the human genome to be under selective constraint using GERP++ EV Davydov, DL Goode, M Sirota, GM Cooper, A Sidow, S Batzoglou PLoS computational biology 6 (12), e1001025, 2010	1915	2010
Predicting splicing from primary sequence with deep learning K Jaganathan, SK Panagiotopoulou, JF McRae, SF Darbandi, D Knowles, ... Cell 176 (3), 535-548. e24, 2019	1854	2019
Architecture of the human regulatory network derived from ENCODE data MB Gerstein, A Kundaje, M Hariharan, SG Landt, KK Yan, C Cheng, ... Nature 489 (7414), 91-100, 2012	1716	2012
Distribution and intensity of constraint in mammalian genomic sequence GM Cooper, EA Stone, G Asimenos, ED Green, S Batzoglou, A Sidow Genome research 15 (7), 901-913, 2005	1638	2005
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae JE Galagan, SE Calvo, C Cuomo, LJ Ma, JR Wortman, S Batzoglou, ... Nature 438 (7071), 1105-1115, 2005	1637	2005
ProbCons: Probabilistic consistency-based multiple sequence alignment CB Do, MSP Mahabhashyam, M Brudno, S Batzoglou Genome research 15 (2), 330-340, 2005	1484	2005
A user's guide to the encyclopedia of DNA elements (ENCODE) RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ... PLoS Biology 9 (4), e1001046, 2011	1481	2011
LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA M Brudno, CB Do, GM Cooper, MF Kim, E Davydov, ED Green, A Sidow, ... Genome research 13 (4), 721-731, 2003	1378	2003
Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data A Valouev, DS Johnson, A Sundquist, C Medina, E Anton, S Batzoglou, ... Nature methods 5 (9), 829-834, 2008	923	2008
Linking disease associations with regulatory information in the human genome MA Schaub, AP Boyle, A Kundaje, S Batzoglou, M Snyder Genome research 22 (9), 1748-1759, 2012	904	2012
What is the expectation maximization algorithm? CB Do, S Batzoglou Nature biotechnology 26 (8), 897-899, 2008	830	2008
ARACHNE: a whole-genome shotgun assembler S Batzoglou, DB Jaffe, K Stanley, J Butler, S Gnerre, E Mauceli, B Berger, ... Genome research 12 (1), 177-189, 2002	793	2002
CONTRAfold: RNA secondary structure prediction without physics-based models CB Do, DA Woods, S Batzoglou Bioinformatics 22 (14), e90-e98, 2006	731	2006

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