Прати
Jaap Heringa
Jaap Heringa
Professor of Bioinformatics, Vrije Universiteit Amsterdam
Верификована је имејл адреса на vu.nl
Наслов
Навело
Навело
Година
The FAIR Guiding Principles for scientific data management and stewardship
MD Wilkinson, M Dumontier, IJJ Aalbersberg, G Appleton, M Axton, ...
Scientific data 3 (1), 1-9, 2016
165962016
T-Coffee: A novel method for fast and accurate multiple sequence alignment
C Notredame, DG Higgins, J Heringa
Journal of molecular biology 302 (1), 205-217, 2000
89022000
’t Hoen
MD Wilkinson, M Dumontier, IJ Aalbersberg, G Appleton, M Axton, A Baak, ...
PAC, Hooft, R, Kuhn, T, Kok, R, Kok, J, Lusher, SJ, Martone, ME, Mons, A …, 2016
8692016
PRALINE: a multiple sequence alignment toolbox that integrates homology-extended and secondary structure information
VA Simossis, J Heringa
Nucleic acids research 33 (suppl_2), W289-W294, 2005
5842005
An analysis of protein domain linkers: their classification and role in protein folding
RA George, J Heringa
Protein engineering 15 (11), 871-879, 2002
5482002
A simple and fast secondary structure prediction method using hidden neural networks
K Lin, VA Simossis, WR Taylor, J Heringa
Bioinformatics 21 (2), 152-159, 2005
3662005
FAIR principles: interpretations and implementation considerations
A Jacobsen, R de Miranda Azevedo, N Juty, D Batista, S Coles, R Cornet, ...
Data intelligence 2 (1-2), 10-29, 2020
3552020
The KH domain occurs in a diverse set of RNA‐binding proteins that include the antiterminator NusA and is probably involved in binding to nucleic acid
TJ Gibson, JD Thompson, J Heringa
FEBS letters 324 (3), 361-366, 1993
2671993
General secretion signal for the mycobacterial type VII secretion pathway
MH Daleke, R Ummels, P Bawono, J Heringa, ...
Proceedings of the National Academy of Sciences 109 (28), 11342-11347, 2012
2342012
Two strategies for sequence comparison: profile-preprocessed and secondary structure-induced multiple alignment
J Heringa
Computers & chemistry 23 (3-4), 341-364, 1999
2011999
Interaction of transmembrane helices by a knobs‐into‐holes packing characteristic of soluble coiled coils
D Langosch, J Heringa
Proteins: Structure, Function, and Bioinformatics 31 (2), 150-159, 1998
1901998
The FAIR Guiding Principles for scientific data management and stewardship. Sci Data 3, 160018 (2016)
M Wilkinson, M Dumontier, I Aalbersberg, G Appleton, M Axton, A Baak, ...
1772016
Tracking repeats using significance and transitivty.
R Szklarczyk, J Heringa
Bioinformatics 20 (Suppl 1), i311-i317, 2004
1682004
Protein secondary structure prediction
W Pirovano, J Heringa
Data Mining Techniques for the Life Sciences, 327-348, 2010
1642010
Homology-extended sequence alignment
VA Simossis, J Kleinjung, J Heringa
Nucleic acids research 33 (3), 816-824, 2005
1442005
PRALINE™: a strategy for improved multiple alignment of transmembrane proteins
W Pirovano, KA Feenstra, J Heringa
Bioinformatics 24 (4), 492-497, 2008
1412008
The ontogeny of a dominance hierarchy in colonies of the bumblebee Bombus terrestris (Hymenoptera, Apidae)
A Van Doorn, J Heringa
Insectes soc 33 (3), 25, 1986
1411986
PhyloPars: estimation of missing parameter values using phylogeny
J Bruggeman, J Heringa, BW Brandt
Nucleic acids research 37 (suppl_2), W179-W184, 2009
1342009
Side-chain clusters in protein structures and their role in protein folding
J Heringa, P Argos
Journal of molecular biology 220 (1), 151-171, 1991
1291991
SnapDRAGON: a method to delineate protein structural domains from sequence data
RA George, J Heringa
Journal of molecular biology 316 (3), 839-851, 2002
1232002
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Чланци 1–20