Прати
Tom Ferrin
Tom Ferrin
Professor of Pharmaceutical Chemistry, UCSF
Верификована је имејл адреса на cgl.ucsf.edu - Почетна страница
Наслов
Навело
Навело
Година
UCSF Chimera—a visualization system for exploratory research and analysis
EF Pettersen, TD Goddard, CC Huang, GS Couch, DM Greenblatt, ...
Journal of computational chemistry 25 (13), 1605-1612, 2004
468272004
UCSF ChimeraX: Structure visualization for researchers, educators, and developers
EF Pettersen, TD Goddard, CC Huang, EC Meng, GS Couch, TI Croll, ...
Protein science 30 (1), 70-82, 2021
67782021
UCSF ChimeraX: Meeting modern challenges in visualization and analysis
TD Goddard, CC Huang, EC Meng, EF Pettersen, GS Couch, JH Morris, ...
Protein science 27 (1), 14-25, 2018
43812018
A geometric approach to macromolecule-ligand interactions
ID Kuntz, JM Blaney, SJ Oatley, R Langridge, TE Ferrin
Journal of molecular biology 161 (2), 269-288, 1982
32651982
UCSF ChimeraX: Tools for structure building and analysis
EC Meng, TD Goddard, EF Pettersen, GS Couch, ZJ Pearson, JH Morris, ...
Protein Science 32 (11), e4792, 2023
12882023
The MIDAS display system
TE Ferrin, CC Huang, LE Jarvis, R Langridge
Journal of molecular graphics 6 (1), 13-27, 1988
12181988
Visualizing density maps with UCSF Chimera
TD Goddard, CC Huang, TE Ferrin
Journal of structural biology 157 (1), 281-287, 2007
9312007
Tools for integrated sequence-structure analysis with UCSF Chimera
EC Meng, EF Pettersen, GS Couch, CC Huang, TE Ferrin
BMC bioinformatics 7, 1-10, 2006
7512006
UCSF Chimera, MODELLER, and IMP: an integrated modeling system
Z Yang, K Lasker, D Schneidman-Duhovny, B Webb, CC Huang, ...
Journal of structural biology 179 (3), 269-278, 2012
6972012
clusterMaker: a multi-algorithm clustering plugin for Cytoscape
JH Morris, L Apeltsin, AM Newman, J Baumbach, T Wittkop, G Su, ...
BMC bioinformatics 12, 1-14, 2011
6632011
Designed divergent evolution of enzyme function
Y Yoshikuni, TE Ferrin, JD Keasling
Nature 440 (7087), 1078-1082, 2006
5482006
modbase, a database of annotated comparative protein structure models and associated resources
U Pieper, N Eswar, BM Webb, D Eramian, L Kelly, DT Barkan, H Carter, ...
Nucleic acids research 37 (suppl_1), D347-D354, 2009
5232009
Sequence diversity and haplotype structure in the human ABCB1 (MDR1, multidrug resistance transporter) gene
DL Kroetz, C Pauli-Magnus, LM Hodges, CC Huang, M Kawamoto, ...
Pharmacogenetics and Genomics 13 (8), 481-494, 2003
5122003
Using sequence similarity networks for visualization of relationships across diverse protein superfamilies
HJ Atkinson, JH Morris, TE Ferrin, PC Babbitt
PloS one 4 (2), e4345, 2009
5072009
Evolutionary conservation predicts function of variants of the human organic cation transporter, OCT1
Y Shu, MK Leabman, B Feng, LM Mangravite, CC Huang, D Stryke, ...
Proceedings of the National Academy of Sciences 100 (10), 5902-5907, 2003
3472003
ModBase, a database of annotated comparative protein structure models, and associated resources
U Pieper, BM Webb, DT Barkan, D Schneidman-Duhovny, A Schlessinger, ...
Nucleic acids research 39 (suppl_1), D465-D474, 2010
3352010
Real-time color graphics in studies of molecular interactions
R Langridge, TE Ferrin, ID Kuntz, ML Connolly
Science 211 (4483), 661-666, 1981
3201981
UCSF Chimera–a visualization system for exploratory research and analysis
EF Petterson, TD Goddard, CC Huang, GS Couch, DM Greenblatt, ...
J. Comput. chem 25 (13), 1605-12, 2004
3072004
Chimera: an extensible molecular modeling application constructed using standard components
CC Huang, GS Couch, EF Pettersen, TE Ferrin
Pacific symposium on biocomputing 1, 724, 1996
2951996
Software extensions to UCSF chimera for interactive visualization of large molecular assemblies
TD Goddard, CC Huang, TE Ferrin
Structure 13 (3), 473-482, 2005
2862005
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Чланци 1–20