| Network motifs: simple building blocks of complex networks R Milo, S Shen-Orr, S Itzkovitz, N Kashtan, D Chklovskii, U Alon Science 298 (5594), 824-827, 2002 | 9166 | 2002 |
| Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays U Alon, N Barkai, DA Notterman, K Gish, S Ybarra, D Mack, AJ Levine Proceedings of the National Academy of Sciences 96 (12), 6745-6750, 1999 | 5726 | 1999 |
| An introduction to systems biology: design principles of biological circuits U Alon Chapman and Hall/CRC, 2019 | 4920 | 2019 |
| Network motifs: theory and experimental approaches U Alon Nature Reviews Genetics 8 (6), 450-461, 2007 | 3915 | 2007 |
| Network motifs in the transcriptional regulation network of Escherichia coli SS Shen-Orr, R Milo, S Mangan, U Alon Nature genetics 31 (1), 64-68, 2002 | 3861 | 2002 |
| Structure and function of the feed-forward loop network motif S Mangan, U Alon Proceedings of the National Academy of Sciences 100 (21), 11980-11985, 2003 | 2199 | 2003 |
| Superfamilies of evolved and designed networks R Milo, S Itzkovitz, N Kashtan, R Levitt, S Shen-Orr, I Ayzenshtat, ... Science 303 (5663), 1538-1542, 2004 | 1784 | 2004 |
| How attentive are graph attention networks? S Brody, U Alon, E Yahav arXiv preprint arXiv:2105.14491, 2021 | 1553 | 2021 |
| code2vec: Learning distributed representations of code U Alon, M Zilberstein, O Levy, E Yahav Proceedings of the ACM on Programming Languages 3 (POPL), 1-29, 2019 | 1536 | 2019 |
| Robustness in bacterial chemotaxis U Alon, MG Surette, N Barkai, S Leibler Nature 397 (6715), 168-171, 1999 | 1527 | 1999 |
| Gene regulation at the single-cell level N Rosenfeld, JW Young, U Alon, PS Swain, MB Elowitz science 307 (5717), 1962-1965, 2005 | 1383 | 2005 |
| Self-refine: Iterative refinement with self-feedback A Madaan, N Tandon, P Gupta, S Hallinan, L Gao, S Wiegreffe, U Alon, ... Advances in Neural Information Processing Systems 36, 46534-46594, 2023 | 1326 | 2023 |
| Dynamics of the p53-Mdm2 feedback loop in individual cells G Lahav, N Rosenfeld, A Sigal, N Geva-Zatorsky, AJ Levine, MB Elowitz, ... Nature genetics 36 (2), 147-150, 2004 | 1289 | 2004 |
| Spontaneous evolution of modularity and network motifs N Kashtan, U Alon Proceedings of the National Academy of Sciences 102 (39), 13773-13778, 2005 | 1113 | 2005 |
| Optimality and evolutionary tuning of the expression level of a protein E Dekel, U Alon Nature 436 (7050), 588-592, 2005 | 934 | 2005 |
| A comprehensive library of fluorescent transcriptional reporters for Escherichia coli A Zaslaver, A Bren, M Ronen, S Itzkovitz, I Kikoin, S Shavit, ... Nature methods 3 (8), 623-628, 2006 | 925 | 2006 |
| On the bottleneck of graph neural networks and its practical implications U Alon, E Yahav arXiv preprint arXiv:2006.05205, 2020 | 916 | 2020 |
| Negative autoregulation speeds the response times of transcription networks N Rosenfeld, MB Elowitz, U Alon Journal of molecular biology 323 (5), 785-793, 2002 | 907 | 2002 |
| code2seq: Generating sequences from structured representations of code U Alon, S Brody, O Levy, E Yahav arXiv preprint arXiv:1808.01400, 2018 | 894 | 2018 |
| Biological networks: the tinkerer as an engineer U Alon Science 301 (5641), 1866-1867, 2003 | 817 | 2003 |
