| Efficient computation of parameter sensitivities of discrete stochastic chemical reaction networks M Rathinam, PW Sheppard, M Khammash The Journal of chemical physics 132 (3), 2010 | 127 | 2010 |
| A pathwise derivative approach to the computation of parameter sensitivities in discrete stochastic chemical systems PW Sheppard, M Rathinam, M Khammash The Journal of chemical physics 136 (3), 2012 | 62 | 2012 |
| Overexpression of heat shock protein 72 attenuates NF-κB activation using a combination of regulatory mechanisms in microglia PW Sheppard, X Sun, M Khammash, RG Giffard PLoS computational biology 10 (2), e1003471, 2014 | 47 | 2014 |
| Quantitative characterization and analysis of the dynamic NF-κB response in microglia PW Sheppard, X Sun, JF Emery, RG Giffard, M Khammash BMC bioinformatics 12 (1), 276, 2011 | 22 | 2011 |
| SPSens: a software package for stochastic parameter sensitivity analysis of biochemical reaction networks PW Sheppard, M Rathinam, M Khammash Bioinformatics 29 (1), 140-142, 2013 | 14 | 2013 |
| User Guide: SPSens (version beta. 3.4) PW Sheppard | | 2012 |
| Cellular Strategies for Controlling the Glial Response to Ischemic Injury and Sensitivity Analysis of Stochastic Biochemical Reaction Networks PW Sheppard University of California, Santa Barbara, 2012 | | 2012 |
| Low variability estimators for sensitivity analysis of stochastic biochemical reaction systems M Rathinam, PW Sheppard, M Khammash | | |
| Swing Up Control of the Pendubot P Sheppard | | |
| A Computational Model of Apoptosis and Inflammation Signaling in Microglia PW Sheppard, J Johnson, RG Giffard, M Khammash | | |