Članki z zahtevami za javni dostop - Kevin KarplusVeč o tem
Na voljo nekje: 15
Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega
F Sievers, A Wilm, D Dineen, TJ Gibson, K Karplus, W Li, R Lopez, ...
Molecular systems biology 7 (1), 539, 2011
Zahteve: Science Foundation Ireland
Improving physical realism, stereochemistry, and side‐chain accuracy in homology modeling: Four approaches that performed well in CASP8
E Krieger, K Joo, J Lee, J Lee, S Raman, J Thompson, M Tyka, D Baker, ...
Proteins: Structure, Function, and Bioinformatics 77 (S9), 114-122, 2009
Zahteve: US National Institutes of Health
Automated forward and reverse ratcheting of DNA in a nanopore at 5-Å precision
GM Cherf, KR Lieberman, H Rashid, CE Lam, K Karplus, M Akeson
Nature biotechnology 30 (4), 344-348, 2012
Zahteve: US National Institutes of Health
Error rates for nanopore discrimination among cytosine, methylcytosine, and hydroxymethylcytosine along individual DNA strands
J Schreiber, ZL Wescoe, R Abu-Shumays, JT Vivian, B Baatar, K Karplus, ...
Proceedings of the National Academy of Sciences 110 (47), 18910-18915, 2013
Zahteve: US National Institutes of Health
SAM-T08, HMM-based protein structure prediction
K Karplus
Nucleic acids research 37 (suppl_2), W492-W497, 2009
Zahteve: US National Institutes of Health
Fallacy of the Unique Genome: Sequence Diversity within Single Helicobacter pylori Strains
JL Draper, LM Hansen, DL Bernick, S Abedrabbo, JG Underwood, ...
MBio 8 (1), 10.1128/mbio. 02321-16, 2017
Zahteve: US National Institutes of Health
Predict-2nd: a tool for generalized protein local structure prediction
S Katzman, C Barrett, G Thiltgen, R Karchin, K Karplus
Bioinformatics 24 (21), 2453-2459, 2008
Zahteve: US National Institutes of Health
Analysis of nanopore data using hidden Markov models
J Schreiber, K Karplus
Bioinformatics 31 (12), 1897-1903, 2015
Zahteve: US National Institutes of Health
Identification of a chemoreceptor zinc-binding domain common to cytoplasmic bacterial chemoreceptors
J Draper, K Karplus, KM Ottemann
Journal of bacteriology 193 (17), 4338-4345, 2011
Zahteve: US National Institutes of Health
Identification of prokaryotic small proteins using a comparative genomic approach
J Samayoa, FH Yildiz, K Karplus
Bioinformatics 27 (13), 1765-1771, 2011
Zahteve: US National Institutes of Health
Applying undertaker cost functions to model quality assessment
J Archie, K Karplus
Proteins: Structure, Function, and Bioinformatics 75 (3), 550-555, 2009
Zahteve: US National Institutes of Health
Model quality assessment using distance constraints from alignments
M Paluszewski, K Karplus
Proteins: Structure, Function, and Bioinformatics 75 (3), 540-549, 2009
Zahteve: US National Institutes of Health
Applying Undertaker to quality assessment
JG Archie, M Paluszewski, K Karplus
Proteins: Structure, Function, and Bioinformatics 77 (S9), 191-195, 2009
Zahteve: US National Institutes of Health
Segmentation of noisy signals generated by a nanopore
J Schreiber, K Karplus
bioRxiv, 014258, 2015
Zahteve: US National Institutes of Health
Altering under-represented DNA sequences elevates bacterial transformation efficiency
S Hu, S Giacopazzi, R Modlin, K Karplus, DL Bernick, KM Ottemann
MBio 14 (6), e02105-23, 2023
Zahteve: US National Institutes of Health
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