Spremljaj
Anna Kuchina
Anna Kuchina
Institute for Systems Biology
Preverjeni e-poštni naslov na isbscience.org - Domača stran
Naslov
Navedeno
Navedeno
Leto
Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
AB Rosenberg, CM Roco, RA Muscat, A Kuchina, P Sample, Z Yao, ...
Science 360 (6385), 176-182, 2018
13632018
Microbial single-cell RNA sequencing by split-pool barcoding
A Kuchina, LM Brettner, L Paleologu, CM Roco, AB Rosenberg, ...
Science 371 (6531), eaba5257, 2021
2542021
Deep learning of the regulatory grammar of yeast 5' untranslated regions from 500,000 random sequences.
SFGS Josh T. Cuperus, Benjamin Groves, Anna Kuchina, Alexander B. Rosenberg ...
Genome Research, 2017
2222017
Chromosomal arrangement of phosphorelay genes couples sporulation and DNA replication
J Narula, A Kuchina, DL Dong-yeon, M Fujita, GM Süel, OA Igoshin
Cell 162 (2), 328-337, 2015
1052015
Temporal competition between differentiation programs determines cell fate choice
A Kuchina, L Espinar, T Cagatay, A Balbin, A Alvarado, F Zhang, ...
Molecular Systems Biology 7 (1), 2011
932011
Combinatorial photo-controlled spatial sequencing and labeling
G Seelig, A Kuchina, AB Rosenberg
US Patent 10,633,648, 2020
872020
Reversible and noisy progression towards a commitment point enables adaptable and reliable cellular decision-making
A Kuchina, L Espinar, J Garcia-Ojalvo, GM Süel
PLoS computational biology 7 (11), e1002273, 2011
512011
Slowdown of growth controls cellular differentiation
J Narula, A Kuchina, F Zhang, M Fujita, GM Süel, OA Igoshin
Molecular systems biology 12 (5), 871, 2016
482016
SPLiT-seq reveals cell types and lineages in the developing brain and spinal cord
AB Rosenberg, CM Roco, RA Muscat, A Kuchina, P Sample, Z Yao, ...
Science (New York, NY) 360 (6385), 176, 2018
262018
Inverse Gillespie for inferring stochastic reaction mechanisms from intermittent samples
I Chattopadhyay, A Kuchina, GM Süel, H Lipson
Proceedings of the National Academy of Sciences 110 (32), 12990-12995, 2013
172013
High-throughput single-cell transcriptomics of bacteria using combinatorial barcoding
KD Gaisser, SN Skloss, LM Brettner, L Paleologu, CM Roco, ...
Nature Protocols 19 (10), 3048-3084, 2024
32024
Single-cell RNA sequencing reveals plasmid constrains bacterial population heterogeneity and identifies a non-conjugating subpopulation
V Cyriaque, R Ibarra-Chávez, A Kuchina, G Seelig, J Nesme, JS Madsen
Nature Communications 15 (1), 5853, 2024
22024
Method for preparation and high-throughput microbial single-cell RNA sequencing of bacteria
G Seelig, A Kuchina, L Brettner, W DePaolo
US Patent 12,163,189, 2024
12024
Combinatorial photo-controlled spatial sequencing and labeling
G Seelig, A Kuchina, AB Rosenberg
US Patent 11,421,221, 2022
12022
Combinatorial phenotypic landscape enables bacterial resistance to phage infection
A Gupta, N Morella, D Sutormin, N Li, K Gaisser, A Robertson, Y Ispolatov, ...
bioRxiv, 2025.01. 13.632860, 2025
2025
Method for preparation and high-throughput microbial single-cell rna sequencing of bacteria
G Seelig, A Kuchina, L Brettner, W DePaolo
US Patent App. 18/415,802, 2024
2024
Method for preparation and high-throughput microbial single-cell rna sequencing of bacteria
G Seelig, A Kuchina, L Brettner, W DePaolo
US Patent App. 18/406,472, 2024
2024
Single-cell RNA sequencing suggests plasmids constrain bacterial heterogeneity and conjugation is subpopulation specific
V Cyriaque, R Ibarra-Chávez, A Kuchina, G Seelig, J Nesme, J Madsen
2023
Combinatorial photo-controlled spatial sequencing and labeling
G Seelig, A Kuchina, AB Rosenberg
US Patent App. 17/864,690, 2023
2023
How can systems approaches help us understand and treat infectious disease?
A Kuchina, J Yang, B Aldridge, KA Janes, N Subramanian, NJ Krogan, ...
Cell Systems 13 (12), 945-949, 2022
2022
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