| Improved RNA secondary structure and tertiary base-pairing prediction using evolutionary profile, mutational coupling and two-dimensional transfer learning J Singh, K Paliwal, T Zhang, J Singh, T Litfin, Y Zhou Bioinformatics 37 (17), 2589-2600, 2021 | 80 | 2021 |
| SPOT-Contact-LM: improving single-sequence-based prediction of protein contact map using a transformer language model J Singh, T Litfin, J Singh, K Paliwal, Y Zhou Bioinformatics 38 (7), 1888-1894, 2022 | 48 | 2022 |
| SPOT-1D-Single: improving the single-sequence-based prediction of protein secondary structure, backbone angles, solvent accessibility and half-sphere exposures using a large … J Singh, T Litfin, K Paliwal, J Singh, AK Hanumanthappa, Y Zhou Bioinformatics 37 (20), 3464-3472, 2021 | 46 | 2021 |
| Reaching alignment-profile-based accuracy in predicting protein secondary and tertiary structural properties without alignment J Singh, K Paliwal, T Litfin, J Singh, Y Zhou Scientific reports 12 (1), 7607, 2022 | 43 | 2022 |
| Single-sequence and profile-based prediction of RNA solvent accessibility using dilated convolutional neural network AK Hanumanthappa, J Singh, K Paliwal, J Singh, Y Zhou Bioinformatics 36 (21), 5169-5176, 2020 | 31 | 2020 |
| Toxicity prediction by multimodal deep learning A Karim, J Singh, A Mishra, A Dehzangi, MAH Newton, A Sattar Knowledge Management and Acquisition for Intelligent Systems: 16th Pacific …, 2019 | 30 | 2019 |
| RNA backbone torsion and pseudotorsion angle prediction using dilated convolutional neural networks J Singh, K Paliwal, J Singh, Y Zhou Journal of Chemical Information and Modeling 61 (6), 2610-2622, 2021 | 28 | 2021 |
| Predicting RNA distance-based contact maps by integrated deep learning on physics-inferred secondary structure and evolutionary-derived mutational coupling J Singh, K Paliwal, T Litfin, J Singh, Y Zhou Bioinformatics 38 (16), 3900-3910, 2022 | 23 | 2022 |
| Improved RNA homology detection and alignment by automatic iterative search in an expanded database J Singh, K Paliwal, J Singh, T Litfin, Y Zhou bioRxiv, 2022.10. 03.510702, 2022 | 4 | 2022 |
| SPOT-1D2: Improving protein secondary structure prediction using high sequence identity training set and an ensemble of recurrent and residual-convolutional neural networks J Singh, J Singh, K Paliwal, A Busch, Y Zhou 2021 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2021 | 3 | 2021 |
| Protein Structure Prediction using Deep Learning J Singh Griffith University, 2023 | | 2023 |
Jaswinder SinghGriffith UniversityPreverjeni e-poštni naslov na griffithuni.edu.au