Članki z zahtevami za javni dostop - Fabrizio MarinelliVeč o tem
Ni na voljo nikjer: 1
Atomic‐resolution dissection of the energetics and mechanism of isomerization of hydrated ATP‐Mg2+ through the SOMA string method
D Branduardi, F Marinelli, JD Faraldo‐Gómez
Journal of Computational Chemistry, 2015
Zahteve: US National Institutes of Health
Na voljo nekje: 19
METAGUI. A VMD interface for analyzing metadynamics and molecular dynamics simulations
X Biarnés, F Pietrucci, F Marinelli, A Laio
Computer Physics Communications 183 (1), 203-211, 2012
Zahteve: Government of Spain
Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger
J Liao, F Marinelli, C Lee, Y Huang, JD Faraldo-Gómez, Y Jiang
Nature Structural & Molecular Biology, 2016
Zahteve: US Department of Energy, US National Institutes of Health, Howard Hughes …
Atomistic simulations indicate the c-subunit ring of the F1Fo ATP synthase is not the mitochondrial permeability transition pore
W Zhou, F Marinelli, C Nief, JD Faraldo-Gómez
eLife, 2017
Zahteve: US National Institutes of Health
Sodium recognition by the Na+/Ca2+ exchanger in the outward-facing conformation
F Marinelli, L Almagorb, R Hillerb, M Giladib, D Khananshvilib, ...
Proceedings of the National Academy of Sciences, 2014
Zahteve: US National Institutes of Health
Ensemble-Biased Metadynamics: A Molecular Simulation Method to Sample Experimental Distributions
F Marinelli, JD Faraldo-Gómez
Biophysical Journal 108 (12), 2779-2782, 2015
Zahteve: US National Institutes of Health
Predicting the effect of a point mutation on a protein fold: the villin and advillin headpieces and their Pro62Ala mutants
S Piana, A Laio, F Marinelli, M Van Troys, D Bourry, C Ampe, JC Martins
Journal of molecular biology 375 (2), 460-470, 2008
Zahteve: Research Foundation (Flanders)
Confidence Analysis of DEER Data and Its Structural Interpretation with Ensemble-Biased Metadynamics
EJ Hustedt, F Marinelli, RA Stein, JD Faraldo-Gómez, HS Mchaourab
Biophysical Journal 115, 1200–1216, 2018
Zahteve: US National Institutes of Health
Molecular mechanisms of human P2X3 receptor channel activation and modulation by divalent cation bound ATP
M Li, Y Wang, R Banerjee, F Marinelli, S Silberberg, JD Faraldo-Gómez, ...
eLife 8, e47060, 2019
Zahteve: US National Institutes of Health, National Natural Science Foundation of China
Two-state dynamics of the SH3–SH2 tandem of Abl kinase and the allosteric role of the N-cap
C Corbi-Verge, F Marinelli, A Zafra-Ruano, J Ruiz-Sanz, I Luque, ...
Proceedings of the National Academy of Sciences 110 (36), E3372-E3380, 2013
Zahteve: German Research Foundation, Government of Spain
Interpretation of HDX Data by Maximum-Entropy Reweighting of Simulated Structural Ensembles
RT Bradshaw, F Marinelli, JD Faraldo-Gómez, LR Forrest
Biophysical Journal, 2020
Zahteve: US National Institutes of Health
Direct Derivation of Free Energies of Membrane Deformation and Other Solvent Density Variations From Enhanced Sampling Molecular Dynamics
G Fiorin, F Marinelli, JD Faraldo‐Gómez
Journal of computational chemistry, 2019
Zahteve: US National Institutes of Health
The prokaryotic Na+/Ca2+ exchanger NCX_Mj transports Na+ and Ca2+ in a 3: 1 stoichiometry
I Shlosman, F Marinelli, JD Faraldo-Gómez, JA Mindell
The Journal of General Physiology, jgp. 201711897, 2017
Zahteve: US National Institutes of Health
Structural Characterization of Biomolecules through Atomistic Simulations Guided by DEER Measurements
F Marinelli, G Fiorin
Structure, 2018
Zahteve: US National Institutes of Health
Differential ion dehydration energetics explains selectivity in the non-canonical lysosomal K+ channel TMEM175
SC Oh, F Marinelli, W Zhou, J Lee, HJ Choi, M Kim, JD Faraldo-Gómez, ...
eLife 11, e75122, 2022
Zahteve: US National Institutes of Health
Interpreting Hydrogen-Deuterium Exchange Experiments with Molecular Simulations: Tutorials and Applications of the HDXer Ensemble Reweighting Software [Article v1. 0]
PS Lee, R Bradshaw, F Marinelli, K Kihn, A Smith, PL Wintrode, ...
Living Journal of Computational Molecular Science 3 (1), 1521-1521, 2021
Zahteve: US National Institutes of Health
Force-Correction Analysis Method for Derivation of Multidimensional Free-Energy Landscapes from Adaptively Biased Replica Simulations
F Marinelli, JD Faraldo-Gómez
Journal of Chemical Theory and Computation 17 (11), 6775-6788, 2021
Zahteve: US National Institutes of Health
PLUMED tutorials: A collaborative, community-driven learning ecosystem
GA Tribello, M Bonomi, G Bussi, C Camilloni, BI Armstrong, A Arsiccio, ...
arXiv preprint arXiv:2412.03595, 2024
Zahteve: UK Engineering and Physical Sciences Research Council, European Commission …
Expanded functionality and portability for the Colvars library
G Fiorin, F Marinelli, LR Forrest, H Chen, C Chipot, A Kohlmeyer, ...
The Journal of Physical Chemistry B, 2024
Zahteve: European Commission, Agence Nationale de la Recherche
Structural Interpretation of Hydrogen-Deuterium Exchange with Maximum-Entropy Simulation Reweighting
RT Bradshaw, F Marinelli, JD Faraldo-Gómez, LR Forrest
bioRxiv, 769398, 2019
Zahteve: US National Institutes of Health
Podatke o objavi in financiranju samodejno določi računalniški program