| Nucleosome landscape and control of transcription in the human malaria parasite N Ponts, EY Harris, J Prudhomme, I Wick, C Eckhardt-Ludka, GR Hicks, ... Genome research 20 (2), 228-238, 2010 | 181 | 2010 |
| Molecular hierarchy of mammary differentiation yields refined markers of mammary stem cells CO dos Santos, C Rebbeck, E Rozhkova, A Valentine, A Samuels, ... Proceedings of the National Academy of Sciences 110 (18), 7123-7130, 2013 | 123 | 2013 |
| Genome-wide mapping of DNA methylation in the human malaria parasite Plasmodium falciparum N Ponts, L Fu, EY Harris, J Zhang, DWD Chung, MC Cervantes, ... Cell host & microbe 14 (6), 696-706, 2013 | 108 | 2013 |
| BRAT-BW: efficient and accurate mapping of bisulfite-treated reads EY Harris, N Ponts, KG Le Roch, S Lonardi Bioinformatics 28 (13), 1795-1796, 2012 | 102 | 2012 |
| BRAT: bisulfite-treated reads analysis tool EY Harris, N Ponts, A Levchuk, KL Roch, S Lonardi bioinformatics 26 (4), 572-573, 2010 | 81 | 2010 |
| Exploration of short reads genome mapping in hardware E Fernandez, W Najjar, E Harris, S Lonardi 2010 International Conference on Field Programmable Logic and Applications …, 2010 | 65 | 2010 |
| Nucleosome occupancy at transcription start sites in the human malaria parasite: a hard-wired evolution of virulence? N Ponts, EY Harris, S Lonardi, KG Le Roch Infection, Genetics and Evolution 11 (4), 716-724, 2011 | 59 | 2011 |
| Isthmin 1 (ism1) is required for normal hematopoiesis in developing zebrafish A Berrun, E Harris, DL Stachura PLoS One 13 (5), e0196872, 2018 | 35 | 2018 |
| BRAT-nova: fast and accurate mapping of bisulfite-treated reads EY Harris, R Ounit, S Lonardi Bioinformatics 32 (17), 2696-2698, 2016 | 30 | 2016 |
| Zebrafish embryonic stromal trunk (ZEST) cells support hematopoietic stem and progenitor cell (HSPC) proliferation, survival, and differentiation C Campbell, T Su, RP Lau, A Shah, PC Laurie, B Avalos, J Aggio, ... Experimental hematology 43 (12), 1047-1061, 2015 | 28 | 2015 |
| Chromatin-driven de novo discovery of DNA binding motifs in the human malaria parasite EY Harris, N Ponts, KG Le Roch, S Lonardi BMC genomics 12, 1-14, 2011 | 13 | 2011 |
| The influence of intestinal bacteria upon the thyroid gland DJ Harries British Medical Journal 1 (3248), 553, 1923 | 8 | 1923 |
| Infect Genet Evol N Ponts, EY Harris, S Lonardi, KG Le Roch Nucleosome occupancy at transcription start sites in the human malaria …, 0 | 7 | |
| Codewit. us: A Platform for Diverse Perspectives in Coding K Buffardi, E Harris, R Wang Proceedings of the 53rd ACM Technical Symposium on Computer Science …, 2022 | 4 | 2022 |
| Bioinformatics sister courses: an interdisciplinary collaborative learning framework to teach bioinformatics EY Harris, D Keller, D Stachura, G Wolfe 2016 International Conference on Computational Science and Computational …, 2016 | 3 | 2016 |
| Bisulfite‐conversion‐based methods for DNA methylation sequencing data analysis E Harris, S Lonardi Computational methods for next generation sequencing data analysis, 227-243, 2016 | 3 | 2016 |
| Exploring Performance Gaps by Gender, Ethnicity and Teaching Modality in CS3 E Harris Journal of Computing Sciences in Colleges 39 (1), 83-92, 2023 | 1 | 2023 |
| Genome-scale discovery of DNA methylations in the malaria parasite N Ponts, EY Harris, DWD Chung, Z Jing, J Prudhomme, EM Rodrigues, ... | 1 | 2011 |
| CPM’s 20th anniversary: A statistical retrospective EY Harris, T Lecroq, G Kucherov, S Lonardi Combinatorial Pattern Matching: 20th Annual Symposium, CPM 2009 Lille …, 2009 | 1 | 2009 |
| Practical Space-efficient Linear Time Construction of FM-index for Large Genomes E Harris 10th International Conference on Bioinformatics and Computational Biology …, 2018 | | 2018 |
