| Genome, epigenome and RNA sequences of monozygotic twins discordant for multiple sclerosis SE Baranzini, J Mudge, JC Van Velkinburgh, P Khankhanian, ... Nature 464 (7293), 1351-1356, 2010 | 588 | 2010 |
| Composition, diversity and abundance of gut microbiome in prediabetes and type 2 diabetes SM Lambeth, T Carson, J Lowe, T Ramaraj, JW Leff, L Luo, CJ Bell, ... Journal of diabetes and obesity 2 (3), 1, 2015 | 331 | 2015 |
| Antigen–antibody interface properties: Composition, residue interactions, and features of 53 non-redundant structures T Ramaraj, T Angel, EA Dratz, AJ Jesaitis, B Mumey Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1824 (3), 520-532, 2012 | 217 | 2012 |
| Single-molecule sequencing and Hi-C-based proximity-guided assembly of amaranth (Amaranthus hypochondriacus) chromosomes provide insights into genome … DJ Lightfoot, DE Jarvis, T Ramaraj, R Lee, EN Jellen, PJ Maughan BMC biology 15, 1-15, 2017 | 139 | 2017 |
| The amaranth genome: genome, transcriptome, and physical map assembly JW Clouse, D Adhikary, JT Page, T Ramaraj, MK Deyholos, JA Udall, ... The Plant Genome 9 (1), plantgenome2015.07.0062, 2016 | 135 | 2016 |
| Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the … LW Meinhardt, GGL Costa, DPT Thomazella, PJPL Teixeira, ... BMC genomics 15, 1-25, 2014 | 132 | 2014 |
| Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes P Zhou, KAT Silverstein, T Ramaraj, J Guhlin, R Denny, J Liu, AD Farmer, ... BMC genomics 18, 1-14, 2017 | 120 | 2017 |
| Genome and evolution of the arbuscular mycorrhizal fungus Diversispora epigaea (formerly Glomus versiforme) and its bacterial endosymbionts X Sun, W Chen, S Ivanov, AM MacLean, H Wight, T Ramaraj, J Mudge, ... New Phytologist 221 (3), 1556-1573, 2019 | 107 | 2019 |
| De Novo Genome Sequence Assemblies of Gossypium raimondii and Gossypium turneri JA Udall, E Long, C Hanson, D Yuan, T Ramaraj, JL Conover, L Gong, ... G3: Genes, Genomes, Genetics 9 (10), 3079-3085, 2019 | 91 | 2019 |
| Hybrid assembly with long and short reads improves discovery of gene family expansions JR Miller, P Zhou, J Mudge, J Gurtowski, H Lee, T Ramaraj, BP Walenz, ... BMC genomics 18, 1-12, 2017 | 72 | 2017 |
| Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula KM Moll, P Zhou, T Ramaraj, D Fajardo, NP Devitt, MJ Sadowsky, ... BMC genomics 18, 1-16, 2017 | 70 | 2017 |
| Novel meiotic miRNAs and indications for a role of phasiRNAs in meiosis S Dukowic-Schulze, A Sundararajan, T Ramaraj, S Kianian, ... Frontiers in Plant Science 7, 762, 2016 | 65 | 2016 |
| Use of a draft genome of coffee (Coffea arabica) to identify SNPs associated with caffeine content HTM Tran, T Ramaraj, A Furtado, LS Lee, RJ Henry Plant biotechnology journal 16 (10), 1756-1766, 2018 | 64 | 2018 |
| The complete chloroplast genome sequences for four Amaranthus species (Amaranthaceae) L Chaney, R Mangelson, T Ramaraj, EN Jellen, PJ Maughan Applications in Plant Sciences 4 (9), 1600063, 2016 | 63 | 2016 |
| Crude oil impairs immune function and increases susceptibility to pathogenic bacteria in southern flounder KM Bayha, N Ortell, CN Ryan, KJ Griffitt, M Krasnec, J Sena, T Ramaraj, ... PLoS One 12 (5), e0176559, 2017 | 61 | 2017 |
| Comparative genomic analysis of two Burkholderia glumae strains from different geographic origins reveals a high degree of plasticity in genome structure … F Francis, J Kim, T Ramaraj, A Farmer, MC Rush, JH Ham Molecular genetics and genomics 288, 195-203, 2013 | 58 | 2013 |
| The transcriptome landscape of early maize meiosis S Dukowic-Schulze, A Sundararajan, J Mudge, T Ramaraj, AD Farmer, ... BMC plant biology 14, 1-15, 2014 | 57 | 2014 |
| The Genome Sequence of Gossypioides kirkii Illustrates a Descending Dysploidy in Plants JA Udall, E Long, T Ramaraj, JL Conover, D Yuan, CE Grover, L Gong, ... Frontiers in Plant Science 10, 1541, 2019 | 46 | 2019 |
| Characterization, correction and de novo assembly of an Oxford Nanopore genomic dataset from Agrobacterium tumefaciens S Deschamps, J Mudge, C Cameron, T Ramaraj, A Anand, K Fengler, ... Scientific reports 6 (1), 28625, 2016 | 42 | 2016 |
| Salt and oxidative stresses uniquely regulate tomato cytokinin levels and transcriptomic response EA Keshishian, HT Hallmark, T Ramaraj, L Plačková, A Sundararajan, ... Plant Direct 2 (7), e00071, 2018 | 39 | 2018 |
Joann MudgeSenior Research Scientist, National Center for Genome Resources (NCGR), Santa Fe, NMPreverjeni e-poštni naslov na ncgr.org
