Matthew Jacobson

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Soavtorji

Patricia BabbittProfessorPreverjeni e-poštni naslov na cgl.ucsf.edu
Matthew Warren VettingAlbert Einstein College of MedicinePreverjeni e-poštni naslov na einstein.yu.edu
Christopher McClendonSenior Principal Scientist, PfizerPreverjeni e-poštni naslov na pfizer.com
Brian ShoichetProfessor of Pharmaceutical Chemistry, University of California, San FranciscoPreverjeni e-poštni naslov na cgl.ucsf.edu
Adam R. RensloProfessor, UCSFPreverjeni e-poštni naslov na ucsf.edu
Ken A. DillDirector of Laufer Center, Stony Brook UniversityPreverjeni e-poštni naslov na laufercenter.org
Andrej SaliUniversity of California, San FranciscoPreverjeni e-poštni naslov na salilab.org
Ilya ChornyIllumina, Inc.Preverjeni e-poštni naslov na illumina.com
Evangelos CoutsiasDepartment of Applied Mathematics and Statistics, Stony Brook UniversityPreverjeni e-poštni naslov na stonybrook.edu
Ramy FaridSchrödinger, Inc.Preverjeni e-poštni naslov na schrodinger.com
John J. IrwinUniversity of California San FranciscoPreverjeni e-poštni naslov na cgl.ucsf.edu
Eric VerdinCEO & President, Buck Institute for Research on AgingPreverjeni e-poštni naslov na buckinstitute.org
Jonathan V SweedlerDirector of the School of Chemical Sciences, University of IllinoisPreverjeni e-poštni naslov na illinois.edu
B. Michael Silber, Ph.D.Chairman, President and CEO, AuriculoCranialTherapy, Inc., Professor, Bioeng and Therap ScienPreverjeni e-poštni naslov na reileypharmaceuticals.com
Glenn MillhauserProfessor, UC Santa CruzPreverjeni e-poštni naslov na ucsc.edu
Kai ZhuSenior Director at BeiGenePreverjeni e-poštni naslov na beigene.com
Jerome NilmeierLawrence Livermore National LaboratoryPreverjeni e-poštni naslov na llnl.gov
Justin MacCallumDepartment of Chemistry, University of CalgaryPreverjeni e-poštni naslov na ucalgary.ca
Laura DominguezSchool of Chemistry, UNAMPreverjeni e-poštni naslov na unam.mx
Jeremy D WilburRelay TherapeuticsPreverjeni e-poštni naslov na relaytx.com

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Matthew Jacobson

UCSF

Preverjeni e-poštni naslov na ucsf.edu - Domača stran

computer-aided drug design computational structural biology


Naslov Razvrsti po navedbah Razvrsti po letniku Razvrsti po naslovu	Navedeno Navedeno	Leto
A SARS-CoV-2 protein interaction map reveals targets for drug repurposing DE Gordon, GM Jang, M Bouhaddou, J Xu, K Obernier, KM White, ... Nature 583 (7816), 459-468, 2020	4774	2020
A hierarchical approach to all‐atom protein loop prediction MP Jacobson, DL Pincus, CS Rapp, TJF Day, B Honig, DE Shaw, ... Proteins: Structure, Function, and Bioinformatics 55 (2), 351-367, 2004	2490	2004
Dysregulated pH: a perfect storm for cancer progression BA Webb, M Chimenti, MP Jacobson, DL Barber Nature Reviews Cancer 11 (9), 671-677, 2011	2285	2011
Novel procedure for modeling ligand/receptor induced fit effects W Sherman, T Day, MP Jacobson, RA Friesner, R Farid Journal of medicinal chemistry 49 (2), 534-553, 2006	2146	2006
On the role of the crystal environment in determining protein side-chain conformations MP Jacobson, RA Friesner, Z Xiang, B Honig Journal of molecular biology 320 (3), 597-608, 2002	1360	2002
SIRT5 regulates the mitochondrial lysine succinylome and metabolic networks MJ Rardin, W He, Y Nishida, JC Newman, C Carrico, SR Danielson, ... Cell metabolism 18 (6), 920-933, 2013	688	2013
Testing the conformational hypothesis of passive membrane permeability using synthetic cyclic peptide diastereomers T Rezai, B Yu, GL Millhauser, MP Jacobson, RS Lokey Journal of the American Chemical Society 128 (8), 2510-2511, 2006	581	2006
SIRT3 deacetylates mitochondrial 3-hydroxy-3-methylglutaryl CoA synthase 2 and regulates ketone body production T Shimazu, MD Hirschey, L Hua, KE Dittenhafer-Reed, B Schwer, ... Cell metabolism 12 (6), 654-661, 2010	540	2010
Conformational flexibility, internal hydrogen bonding, and passive membrane permeability: successful in silico prediction of the relative permeabilities of cyclic peptides T Rezai, JE Bock, MV Zhou, C Kalyanaraman, RS Lokey, MP Jacobson Journal of the American Chemical Society 128 (43), 14073-14080, 2006	480	2006
Gasdermin D pore structure reveals preferential release of mature interleukin-1 S Xia, Z Zhang, VG Magupalli, JL Pablo, Y Dong, SM Vora, L Wang, ... Nature 593 (7860), 607-611, 2021	472	2021
On-resin N-methylation of cyclic peptides for discovery of orally bioavailable scaffolds TR White, CM Renzelman, AC Rand, T Rezai, CM McEwen, VM Gelev, ... Nature chemical biology 7 (11), 810-817, 2011	424	2011
A kinematic view of loop closure EA Coutsias, C Seok, MP Jacobson, KA Dill Journal of computational chemistry 25 (4), 510-528, 2004	349	2004
Intracellular pH sensors: design principles and functional significance J Srivastava, DL Barber, MP Jacobson Physiology, 2007	312	2007
Computer-aided antibody design D Kuroda, H Shirai, MP Jacobson, H Nakamura Protein engineering, design & selection 25 (10), 507-522, 2012	311	2012
Molecular mechanics methods for predicting protein–ligand binding N Huang, C Kalyanaraman, K Bernacki, MP Jacobson Physical Chemistry Chemical Physics 8 (44), 5166-5177, 2006	298	2006
Design of reversible, cysteine-targeted Michael acceptors guided by kinetic and computational analysis S Krishnan, RM Miller, B Tian, RD Mullins, MP Jacobson, J Taunton Journal of the American Chemical Society 136 (36), 12624-12630, 2014	285	2014
Quantifying correlations between allosteric sites in thermodynamic ensembles CL McClendon, G Friedland, DL Mobley, H Amirkhani, MP Jacobson Journal of chemical theory and computation 5 (9), 2486-2502, 2009	262	2009
Cell-permeable cyclic peptides from synthetic libraries inspired by natural products WM Hewitt, SSF Leung, CR Pye, AR Ponkey, M Bednarek, MP Jacobson, ... Journal of the American Chemical Society 137 (2), 715-721, 2015	245	2015
Rescoring docking hit lists for model cavity sites: predictions and experimental testing AP Graves, DM Shivakumar, SE Boyce, MP Jacobson, DA Case, ... Journal of molecular biology 377 (3), 914-934, 2008	237	2008
Cofilin is a pH sensor for actin free barbed end formation: role of phosphoinositide binding C Frantz, G Barreiro, L Dominguez, X Chen, R Eddy, J Condeelis, ... Journal of Cell Biology 183 (5), 865-879, 2008	230	2008

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