AlphaFind: discover structure similarity across the proteome in AlphaFold DB D Procházka, T Slanináková, J Olha, A Rošinec, K Grešová, M Jánošová, ... Nucleic Acids Research 52 (W1), W182-W186, 2024 | 6 | 2024 |
SISAP 2023 Indexing Challenge–Learned Metric Index T Slanináková, D Procházka, M Antol, J Olha, V Dohnal International Conference on Similarity Search and Applications, 282-290, 2023 | 5 | 2023 |
Organizing Similarity Spaces Using Metric Hulls M Jánošová, D Procházka, V Dohnal International Conference on Similarity Search and Applications, 3-16, 2021 | 5* | 2021 |
Scaling learned metric index to 100m datasets D Procházka, T Slanináková, J Čerňanský, J Olha, M Antol, V Dohnal International Conference on Similarity Search and Applications, 266-273, 2024 | 2 | 2024 |
AlphaFind: Discover structure similarity across the entire known proteome D Procházka, T Slanináková, J Olha, A Rošinec, K Grešová, M Jánošová, ... bioRxiv, 2024.02. 15.580465, 2024 | 2 | 2024 |
Indexing structure based on metric hulls D Procházka Masaryk University, Faculty of Informatics, 2021 | 2 | 2021 |
AlphaFind: Discover structure similarity across the entire known proteome. bioRxiv. 2024 D PROCHÁZKA, T SLANINÁKOVÁ, J OLHA, A ROŠINEC, K GREŠOVÁ, ... Available from doi 10 (2024.02), 15.580465, 0 | 2 | |
AlphaFind—discover structure similarity across the proteome in AlphaFold DB T Slanináková, D Procházka, J Oľha, A Rošinec, K Grešová, J Čillík, ... | | 2024 |
AlphaFind—discover structure similarity across the proteome in AlphaFold DB K Grešová, P Špringerová, T Slanináková, D Procházka, J Oľha, ... | | 2024 |
AlphaFind T Slanináková, D Procházka, J Čillík, L Novotná, A Rošinec | | 2024 |
Learned Metric Index T Slanináková, D Procházka | | 2024 |
3D-af-Surfer: Protein structural embeddings of AlphaFold DB L Novotná, T Slanináková, D Procházka, L Hejtmánek, A Rošinec, J Oľha, ... | | 2024 |
LMI-10: Protein structural embeddings of AlphaFold DB L Novotná, T Slanináková, D Procházka, L Hejtmánek, A Rošinec, J Oľha, ... | | 2024 |
3DZD: Protein structural embeddings of ESM Atlas L Novotná, T Slanináková, D Procházka, L Hejtmánek, A Rošinec, J Oľha, ... | | 2024 |
Fast, structure-based searching in a large-scale protein data repository T Slanináková, K Grešová, D Procházka, V Spišaková, A Rošinec, J Čillík, ... | | 2024 |
AlphaFind: Discover structure similarity across the entire known proteome–data and model L Novotná, T Slanináková, D Procházka, L Hejtmánek, K Grešová, J Oľha, ... | | 2024 |