Jaap Heringa

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Anton FeenstraAssistant professor of Bioinformatics, IBIVU Centre for Integrative Bioinformatics, VU UniversityEmail confirmado em vu.nl
Sanne AbelnProfessor of AI Technology for Life, Utrecht UniversityEmail confirmado em uu.nl
Walter PirovanoResearch project manager, gut-brain axis enthusiast, VU UniversityEmail confirmado em vu.nl
des higginsUniversity College DublinEmail confirmado em ucd.ie
Cedric NotredameCentre for Genomic Regulation, SpainEmail confirmado em crg.eu
Punto BawonoThe Centre for Integrative Bioinformatics VU (IBIVU)Email confirmado em vu.nl
William R TaylorDivision head, Mathematical Biology, National Institute for Medical Research, UKEmail confirmado em nimr.mrc.ac.uk
Mark D WilkinsonIsaac Peral Distinguished Researcher, UPMEmail confirmado em upm.es
Gerrit A Meijerprofessor of oncologic pathology, Netherlands Cancer Institute, University Medical Center UtrechtEmail confirmado em nki.nl
Nicola BonzanniVU University AmsterdamEmail confirmado em vu.nl
Niklas BlombergDirector, ELIXIREmail confirmado em ebi.ac.uk
Michel DumontierDistinguished Professor of Data Science, Maastricht UniversityEmail confirmado em maastrichtuniversity.nl
Kuang LinNDPH, Oxford UniversityEmail confirmado em ndph.ox.ac.uk
Qingzhen Hou3BIO-BioInfo - BioModeling, BioInformatics & BioProcesses, Université Libre de BruxellesEmail confirmado em ulb.ac.be
Jens KleinjungNxera TherapeuticsEmail confirmado em jkleinj.eu
Remond J.A. FijnemanNetherlands Cancer Institute, Amsterdam, The NetherlandsEmail confirmado em nki.nl
Wan FokkinkProfessor of Computer Science, Vrije Universiteit AmsterdamEmail confirmado em vu.nl
Richard FinkersGenNovation B.V.Email confirmado em gennovation.nl
Jildau BouwmanTNOEmail confirmado em tno.nl
Philip E. BourneUniversity of VirginiaEmail confirmado em virginia.edu

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Jaap Heringa

Professor of Bioinformatics, Vrije Universiteit Amsterdam

Email confirmado em vu.nl

Bioinformatics


Título Ordenar por citações Ordenar por ano Ordenar por título	Citado por Citado por	Ano
The FAIR Guiding Principles for scientific data management and stewardship MD Wilkinson, M Dumontier, IJJ Aalbersberg, G Appleton, M Axton, ... Scientific data 3 (1), 1-9, 2016	16596	2016
T-Coffee: A novel method for fast and accurate multiple sequence alignment C Notredame, DG Higgins, J Heringa Journal of molecular biology 302 (1), 205-217, 2000	8902	2000
’t Hoen MD Wilkinson, M Dumontier, IJ Aalbersberg, G Appleton, M Axton, A Baak, ... PAC, Hooft, R, Kuhn, T, Kok, R, Kok, J, Lusher, SJ, Martone, ME, Mons, A …, 2016	869	2016
PRALINE: a multiple sequence alignment toolbox that integrates homology-extended and secondary structure information VA Simossis, J Heringa Nucleic acids research 33 (suppl_2), W289-W294, 2005	584	2005
An analysis of protein domain linkers: their classification and role in protein folding RA George, J Heringa Protein engineering 15 (11), 871-879, 2002	548	2002
A simple and fast secondary structure prediction method using hidden neural networks K Lin, VA Simossis, WR Taylor, J Heringa Bioinformatics 21 (2), 152-159, 2005	366	2005
FAIR principles: interpretations and implementation considerations A Jacobsen, R de Miranda Azevedo, N Juty, D Batista, S Coles, R Cornet, ... Data intelligence 2 (1-2), 10-29, 2020	355	2020
The KH domain occurs in a diverse set of RNA‐binding proteins that include the antiterminator NusA and is probably involved in binding to nucleic acid TJ Gibson, JD Thompson, J Heringa FEBS letters 324 (3), 361-366, 1993	267	1993
General secretion signal for the mycobacterial type VII secretion pathway MH Daleke, R Ummels, P Bawono, J Heringa, ... Proceedings of the National Academy of Sciences 109 (28), 11342-11347, 2012	234	2012
Two strategies for sequence comparison: profile-preprocessed and secondary structure-induced multiple alignment J Heringa Computers & chemistry 23 (3-4), 341-364, 1999	201	1999
Interaction of transmembrane helices by a knobs‐into‐holes packing characteristic of soluble coiled coils D Langosch, J Heringa Proteins: Structure, Function, and Bioinformatics 31 (2), 150-159, 1998	190	1998
The FAIR Guiding Principles for scientific data management and stewardship. Sci Data 3, 160018 (2016) M Wilkinson, M Dumontier, I Aalbersberg, G Appleton, M Axton, A Baak, ...	177	2016
Tracking repeats using significance and transitivty. R Szklarczyk, J Heringa Bioinformatics 20 (Suppl 1), i311-i317, 2004	168	2004
Protein secondary structure prediction W Pirovano, J Heringa Data Mining Techniques for the Life Sciences, 327-348, 2010	164	2010
Homology-extended sequence alignment VA Simossis, J Kleinjung, J Heringa Nucleic acids research 33 (3), 816-824, 2005	144	2005
PRALINE™: a strategy for improved multiple alignment of transmembrane proteins W Pirovano, KA Feenstra, J Heringa Bioinformatics 24 (4), 492-497, 2008	141	2008
The ontogeny of a dominance hierarchy in colonies of the bumblebee Bombus terrestris (Hymenoptera, Apidae) A Van Doorn, J Heringa Insectes soc 33 (3), 25, 1986	141	1986
PhyloPars: estimation of missing parameter values using phylogeny J Bruggeman, J Heringa, BW Brandt Nucleic acids research 37 (suppl_2), W179-W184, 2009	134	2009
Side-chain clusters in protein structures and their role in protein folding J Heringa, P Argos Journal of molecular biology 220 (1), 151-171, 1991	129	1991
SnapDRAGON: a method to delineate protein structural domains from sequence data RA George, J Heringa Journal of molecular biology 316 (3), 839-851, 2002	123	2002

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