Sayed-Amir Marashi

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Hamideh FouladihaUniversity of TehranEmail confirmado em ut.ac.ir
Mehdi SadeghiNational institute of genetic engineering and biotechnologyEmail confirmado em nigeb.ac.ir
Bijan RanjbarProfessor of Biophysics, Tarbiat Modares University, Tehran, IranEmail confirmado em modares.ac.ir
Zhaleh HosseiniData Scientist, SASEmail confirmado em sas.com
Changiz EslahchiProfessor of algorithm in bioinformatics, Department of Computer Science, Shahid Beheshti UniversityEmail confirmado em sbu.ac.ir
Zahra GhalanborEmail confirmado em zedat.fu-berlin.de
Nasibeh KhayerSkull Base Research Center, The Five Senses Health Institute, Iran University of Medical SciencesEmail confirmado em iums.ac.ir
Hamid MoghimiDepartment of Microbiology, School of Biology, University of Tehran, TehranEmail confirmado em ut.ac.ir
Nathan E LewisGRA Eminent Scholar and Professor, University of GeorgiaEmail confirmado em uga.edu
Behrouz VaziriPasteur Institute of Iran Email confirmado em pasteur.ac.ir
Ali Mohammad Banaei-MoghaddamDepartment of Biochemistry, Institute of Biochemistry and Biophysics (IBB), University of TehranEmail confirmado em ut.ac.ir
Kaveh KavousiAssociate Professor, Department of Bioinformatics, Institute of Biochemistry and BiophysicsEmail confirmado em ut.ac.ir
Ivan MijakovicChalmers University of Technology & Technical University of DenmarkEmail confirmado em chalmers.se
Javad Aminian-DehkordiUniversity of California, BerkeleyEmail confirmado em berkeley.edu
Seyyed Mohammad MousaviProfessor of Environmental Biotechnology, Chemical Engineering Department, Tarbiat ModaresEmail confirmado em modares.ac.ir
fatemeh goshadroushahid Beheshti Medical SciencesEmail confirmado em sbmu.ac.ir
Bettina MiethFachliche Leitung Klinisches Datenzentrum, Digital Health & Innovation @ VivantesEmail confirmado em vivantes.de
Arvand AsghariMedical Science Liaison, Teva PharmaceuticalsEmail confirmado em uiowa.edu
Parizad BabaeiNovonesisEmail confirmado em sund.ku.dk
Hoda NouriPhD ,Department of Microbial Biotechnology, University of TehranEmail confirmado em ut.ac.ir

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Sayed-Amir Marashi

Associate Professor of Bioinformatics, Department of Biotechnology, University of Tehran, Tehran

Email confirmado em ut.ac.ir

Metabolic Networks Systems Biology Bioinformatics


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Conformational study of human serum albumin in pre-denaturation temperatures by differential scanning calorimetry, circular dichroism and UV spectroscopy M Rezaei-Tavirani, SH Moghaddamnia, B Ranjbar, M Amani, SA Marashi Journal of Biochemistry and Molecular Biology 39 (5), 530-536, 2006	141	2006
Impact of residue accessible surface area on the prediction of protein secondary structures A Momen-Roknabadi, M Sadeghi, H Pezeshk, SA Marashi BMC Bioinformatics 9 (1), 357, 2008	63	2008
Binding of Tris to Bacillus licheniformis [alpha]-Amylase Can Affect Its Starch Hydrolysis Activity Z Ghalanbor, N Ghaemi, SA Marashi, M Amanlou, M Habibi-Rezaei, ... Protein and Peptide Letters 15 (2), 212-214, 2008	58	2008
FFCA: a feasibility-based method for flux coupling analysis of metabolic networks L David, SA Marashi, A Larhlimi, B Mieth, A Bockmayr BMC Bioinformatics 12 (1), 236, 2011	46	2011
A metabolic network-based approach for developing feeding strategies for CHO cells to increase monoclonal antibody production H Fouladiha, SA Marashi, F Torkashvand, F Mahboudi, NE Lewis, B Vaziri Bioprocess and Biosystems Engineering 43, 1381-1389, 2020	45	2020
Biomedical applications of cell- and tissue-specific metabolic network models H Fouladiha, SA Marashi Journal of Biomedical Informatics 68, 35-49, 2017	45	2017
Flux coupling analysis of metabolic networks is sensitive to missing reactions SA Marashi, A Bockmayr BioSystems 103 (1), 57-66, 2011	44	2011
A sperm-specific proteome-scale metabolic network model identifies non-glycolytic genes for energy deficiency in asthenozoospermia A Asghari, SA Marashi, N Ansari-Pour Systems Biology in Reproductive Medicine 63, 100-112, 2017	42	2017
Nanotechnology helps medicine: nanoscale swimmers and their future applications Z Ghalanbor, SA Marashi, B Ranjbar Medical Hypotheses 65 (1), 198-199, 2005	42	2005
[beta]-Sheet capping: Signals that initiate and terminate [beta]-sheet formation F FarzadFard, N Gharaei, H Pezeshk, SA Marashi Journal of Structural Biology 161 (1), 101-110, 2008	40	2008
Correlations between genomic GC levels and optimal growth temperatures are not 'robust' SA Marashi, Z Ghalanbor Biochemical and Biophysical Research Communications 325 (2), 381-383, 2004	40	2004
Rps27a might act as a controller of microglia activation in triggering neurodegenerative diseases N Khayer, M Mirzaie, SA Marashi, M Jalessi PLOS ONE 15 (9), e0239219, 2020	35	2020
A meta-analysis of gene expression data highlights synaptic dysfunction in the hippocampus of brains with Alzheimer’s disease S Hosseinian, E Arefian, H Rakhsh-Khorshid, M Eivani, A Rezayof, ... Scientific Reports 10, 8384, 2020	35	2020
A tale of two symmetrical tails: Structural and functional characteristics of palindromes in proteins A Sheari, M Kargar, A Katanforoush, S Arab, M Sadeghi, H Pezeshk, ... BMC Bioinformatics 9 (1), 274, 2008	32	2008
Impact of RNA structure on the prediction of donor and acceptor splice sites SA Marashi, C Eslahchi, H Pezeshk, M Sadeghi BMC Bioinformatics 7 (1), 297, 2006	32	2006
A systems-based approach for cyanide overproduction by Bacillus megaterium for gold bioleaching enhancement J Aminian-Dehkordi, SM Mousavi, SA Marashi, A Jafari, I Mijakovic Frontiers in Bioengineering and Biotechnology 8, 528, 2020	31	2020
Finding elementary flux modes in metabolic networks based on flux balance analysis and flux coupling analysis: application to the analysis of Escherichia coli metabolism S Tabe-Bordbar, SA Marashi Biotechnology Letters 35 (12), 2039-2044, 2013	27	2013
Analysis of metabolic subnetworks by flux cone projection SA Marashi, L David, A Bockmayr Algorithms for Molecular Biology 7, 17, 2012	27	2012
Manually curated genome-scale reconstruction of the metabolic network of Bacillus megaterium DSM319 J Aminian-Dehkordi, SM Mousavi, A Jafari, I Mijakovic, SA Marashi Scientific Reports 9, 18762, 2019	26	2019
Cancer driver gene discovery in transcriptional regulatory networks using influence maximization approach M Rahimi, B Teimourpour, SA Marashi Computers in Biology and Medicine 114, 103362, 2019	26	2019

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