Eric E. Allen

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Sheila PodellScripps Institution of OceanographyEmail confirmado em ucsd.edu
Jillian BANFIELDUniversity of California BerkeleyEmail confirmado em berkeley.edu
Jeremiah J. Minich, PhDSalkEmail confirmado em salk.edu
Gene W. TysonProfessor, Centre for Microbiome Research, Queensland University of TechnologyEmail confirmado em qut.edu.au
Rob KnightWolfe Family Chair at Rady Children's; Director, Center for Microbiome Innovation; Professor, UCSDEmail confirmado em ucsd.edu
Paul M RichardsonMicroTrek IncorporatedEmail confirmado em microtrek.net
Dr. Karla HeidelbergDepartment of Biology, University of Southern CaliforniaEmail confirmado em usc.edu
Bradley Scott MooreUCSDEmail confirmado em ucsd.edu
Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandEmail confirmado em uq.edu.au
Juan A. UgaldeCenter for Bioinformatics and Integrative Biology, Universidad Andres BelloEmail confirmado em unab.cl
Joanne B. EmersonAssociate Professor, University of California, DavisEmail confirmado em ucdavis.edu
Vinayak AgarwalAssociate Professor, Chemistry & Biochemistry, Biological Sciences. Georgia TechEmail confirmado em gatech.edu
Paul JensenScripps Institution of Oceanography, University of California San DiegoEmail confirmado em ucsd.edu
Andrew E. AllenJ. Craig Venter Institute, Scripps Insitutuon of Oceanography (UCSD)Email confirmado em jcvi.org
Priya NarasingaraoScripps Institution of OceanographyEmail confirmado em ucsd.edu
Jochen J. BrocksProfessor of Geobiology, Research School of Earth Sciences, The Australian National UniversityEmail confirmado em anu.edu.au
Christine ShulseLos Medanos CollegeEmail confirmado em lbl.gov
Kevin PennMassachusetts Institute of TechnologyEmail confirmado em mit.edu
Victor SolovyevVP of Data Science, Auransa Inc.Email confirmado em softberry.com
Jonathan BadgerStaff Scientist, National Cancer InstituteEmail confirmado em nih.gov

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Eric E. Allen

Professor of Marine Microbiology, University of California San Diego

Email confirmado em ucsd.edu

Metagenomics Microbial Genetics Bioinformatics


Título Ordenar por citações Ordenar por ano Ordenar por título	Citado por Citado por	Ano
Community structure and metabolism through reconstruction of microbial genomes from the environment GW Tyson, J Chapman, P Hugenholtz, EE Allen, RJ Ram, PM Richardson, ... Nature 428 (6978), 37-43, 2004	2903	2004
The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing PJ Keeling, F Burki, HM Wilcox, B Allam, EE Allen, LA Amaral-Zettler, ... PLoS biology 12 (6), e1001889, 2014	1082	2014
The genome of a motile marine Synechococcus B Palenik, B Brahamsha, FW Larimer, M Land, L Hauser, P Chain, ... Nature 424 (6952), 1037-1042, 2003	793	2003
A genomic catalog of Earth’s microbiomes S Nayfach, S Roux, R Seshadri, D Udwary, N Varghese, F Schulz, D Wu, ... Nature biotechnology 39 (4), 499-509, 2021	728	2021
The yeast genome directory AEA Goffeau, R Aert, ML Agostini-Carbone, A Ahmed, M Aigle, ... Nature 387 (6632), 5-6, 1997	533	1997
Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species PA Morin, FI Archer, AD Foote, J Vilstrup, EE Allen, P Wade, J Durban, ... Genome research 20 (7), 908-916, 2010	526	2010
The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity N Ziemert, S Podell, K Penn, JH Badger, E Allen, PR Jensen PloS one 7 (3), e34064, 2012	511	2012
Defining and quantifying the core microbiome: challenges and prospects AT Neu, EE Allen, K Roy Proceedings of the National Academy of Sciences 118 (51), e2104429118, 2021	419	2021
De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities P Narasingarao, S Podell, JA Ugalde, C Brochier-Armanet, JB Emerson, ... The ISME journal 6 (1), 81-93, 2012	412	2012
Community cyberinfrastructure for advanced microbial ecology research and analysis: the CAMERA resource S Sun, J Chen, W Li, I Altintas, A Lin, S Peltier, K Stocks, EE Allen, ... Nucleic acids research 39 (suppl_1), D546-D551, 2010	389	2010
Genome-Directed Isolation of the Key Nitrogen Fixer Leptospirillum ferrodiazotrophum sp. nov. from an Acidophilic Microbial Community GW Tyson, I Lo, BJ Baker, EE Allen, P Hugenholtz, JF Banfield Applied and environmental microbiology 71 (10), 6319-6324, 2005	310	2005
Biosynthesis of polybrominated aromatic organic compounds by marine bacteria V Agarwal, AA El Gamal, K Yamanaka, D Poth, RD Kersten, M Schorn, ... Nature chemical biology 10 (8), 640-647, 2014	302	2014
Community genomics in microbial ecology and evolution EE Allen, JF Banfield Nature reviews microbiology 3 (6), 489-498, 2005	299	2005
Monounsaturated but Not Polyunsaturated Fatty Acids Are Required for Growth of the Deep-Sea BacteriumPhotobacterium profundum SS9 at High Pressure and … EE Allen, D Facciotti, DH Bartlett Applied and Environmental Microbiology 65 (4), 1710-1720, 1999	284	1999
Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria I Lo, VJ Denef, NC VerBerkmoes, MB Shah, D Goltsman, G DiBartolo, ... Nature 446 (7135), 537-541, 2007	267	2007
Lineages of acidophilic archaea revealed by community genomic analysis BJ Baker, GW Tyson, RI Webb, J Flanagan, P Hugenholtz, EE Allen, ... Science 314 (5807), 1933-1935, 2006	255	2006
Structure and regulation of the omega-3 polyunsaturated fatty acid synthase genes from the deep-sea bacterium Photobacterium profundum strain SS9 EE Allen, DH Bartlett Microbiology 148 (6), 1903-1913, 2002	247	2002
Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria K Penn, C Jenkins, M Nett, DW Udwary, EA Gontang, RP McGlinchey, ... The ISME journal 3 (10), 1193-1203, 2009	242	2009
Characterization of cyanobacterial hydrocarbon composition and distribution of biosynthetic pathways RC Coates, S Podell, A Korobeynikov, A Lapidus, P Pevzner, ... PloS one 9 (1), e85140, 2014	209	2014
Compositional differences in particle‐associated and free‐living microbial assemblages from an extreme deep‐ocean environment EA Eloe, CN Shulse, DW Fadrosh, SJ Williamson, EE Allen, DH Bartlett Environmental microbiology reports 3 (4), 449-458, 2011	194	2011

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