| Visualization and analysis of gene expression in tissue sections by spatial transcriptomics PL Ståhl, F Salmén, S Vickovic, A Lundmark, JF Navarro, J Magnusson, ... Science 353 (6294), 78-82, 2016 | 2721 | 2016 |
| High-definition spatial transcriptomics for in situ tissue profiling S Vickovic, G Eraslan, F Salmén, J Klughammer, L Stenbeck, D Schapiro, ... Nature methods 16 (10), 987-990, 2019 | 958 | 2019 |
| A spatiotemporal organ-wide gene expression and cell atlas of the developing human heart M Asp, S Giacomello, L Larsson, C Wu, D Fürth, X Qian, E Wärdell, ... Cell 179 (7), 1647-1660. e19, 2019 | 634 | 2019 |
| Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity E Berglund, J Maaskola, N Schultz, S Friedrich, M Marklund, ... Nature communications 9 (1), 2419, 2018 | 483 | 2018 |
| Spatial deconvolution of HER2-positive breast cancer delineates tumor-associated cell type interactions A Andersson, L Larsson, L Stenbeck, F Salmén, A Ehinger, SZ Wu, ... Nature communications 12 (1), 6012, 2021 | 233 | 2021 |
| Methods and product for optimising localised or spatial detection of gene expression in a tissue sample J Frisen, P Stahl, J Lundeberg, F Salmen US Patent 9,593,365, 2017 | 227 | 2017 |
| Barcoded solid-phase RNA capture for Spatial Transcriptomics profiling in mammalian tissue sections F Salmén, PL Ståhl, A Mollbrink, JF Navarro, S Vickovic, J Frisen, ... Nature protocols 13 (11), 2501-2534, 2018 | 186 | 2018 |
| Spatially resolved transcriptome profiling in model plant species S Giacomello, F Salmén, BK Terebieniec, S Vickovic, JF Navarro, ... Nature plants 3 (6), 1-11, 2017 | 168 | 2017 |
| High-throughput total RNA sequencing in single cells using VASA-seq F Salmen, J De Jonghe, TS Kaminski, A Alemany, GE Parada, ... Nature Biotechnology 40 (12), 1780-1793, 2022 | 131 | 2022 |
| ST Pipeline: an automated pipeline for spatial mapping of unique transcripts JF Navarro, J Sjöstrand, F Salmén, J Lundeberg, PL Ståhl Bioinformatics 33 (16), 2591-2593, 2017 | 90 | 2017 |
| Identification and transfer of spatial transcriptomics signatures for cancer diagnosis N Yoosuf, JF Navarro, F Salmén, PL Ståhl, CO Daub Breast Cancer Research 22, 1-10, 2020 | 82 | 2020 |
| Spatial detection of fetal marker genes expressed at low level in adult human heart tissue M Asp, F Salmén, PL Ståhl, S Vickovic, U Felldin, M Löfling, ... Scientific reports 7 (1), 12941, 2017 | 70 | 2017 |
| Gene expression profiling of periodontitis-affected gingival tissue by spatial transcriptomics A Lundmark, N Gerasimcik, T Båge, A Jemt, A Mollbrink, F Salmén, ... Scientific reports 8 (1), 9370, 2018 | 67 | 2018 |
| An automated approach to prepare tissue-derived spatially barcoded RNA-sequencing libraries A Jemt, F Salmén, A Lundmark, A Mollbrink, J Fernández Navarro, ... Scientific reports 6 (1), 37137, 2016 | 62 | 2016 |
| Massive and parallel expression profiling using microarrayed single-cell sequencing S Vickovic, PL Ståhl, F Salmén, S Giatrellis, JO Westholm, A Mollbrink, ... Nature communications 7 (1), 13182, 2016 | 52 | 2016 |
| Multidimensional transcriptomics provides detailed information about immune cell distribution and identity in HER2+ breast tumors F Salmén, S Vickovic, L Larsson, L Stenbeck, J Vallon-Christersson, ... BioRxiv, 358937, 2018 | 25 | 2018 |
| Spatial deconvolution of HER2-positive breast tumors reveals novel intercellular relationships A Andersson, L Larsson, L Stenbeck, F Salmén, A Ehinger, S Wu, ... bioRxiv, 2020.07. 14.200600, 2020 | 21 | 2020 |
| Identification of the stress granule transcriptome via RNA-editing in single cells and in vivo W van Leeuwen, M VanInsberghe, N Battich, F Salmén, ... Cell reports methods 2 (6), 2022 | 14 | 2022 |
| Droplet-based Single-cell Total RNA-seq Reveals Differential Non-Coding Expression and Splicing Patterns during Mouse Development F Salmen, J De Jonghe, TS Kaminski, A Alemany, G Parada, ... bioRxiv, 2021.09. 15.460240, 2021 | 4 | 2021 |
| Corrigendum: An automated approach to prepare tissue-derived spatially barcoded RNA-sequencing libraries A Jemt, F Salmén, A Lundmark, A Mollbrink, JF Navarro, PL Ståhl, ... Scientific Reports 7, 2017 | 4 | 2017 |