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Shubhra Ghosh Dastidar
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Multiple peptide conformations give rise to similar binding affinities: molecular simulations of p53-MDM2
SG Dastidar, DP Lane, CS Verma
Journal of the American Chemical Society 130 (41), 13514-13515, 2008
1022008
Structure, dynamics, and energetics of water at the surface of a small globular protein: a molecular dynamics simulation
SG Dastidar, C Mukhopadhyay
Physical Review E 68 (2), 021921, 2003
752003
HKT1; 5 transporter gene expression and association of amino acid substitutions with salt tolerance across rice genotypes
MUS Shohan, S Sinha, FH Nabila, SG Dastidar, ZI Seraj
Frontiers in Plant Science 10, 1420, 2019
602019
Modulation of p53 binding to MDM2: computational studies reveal important roles of Tyr100
SG Dastidar, DP Lane, CS Verma
BMC bioinformatics 10, 1-11, 2009
432009
Chemical states of the N-terminal “lid” of MDM2 regulate p53 binding: Simulations reveal complexities of modulation
SG Dastidar, D Raghunathan, J Nicholson, TR Hupp, DP Lane, CS Verma
Cell Cycle 10 (1), 82-89, 2011
382011
Discrimination of ligands with different flexibilities resulting from the plasticity of the binding site in tubulin
S Chakraborti, D Chakravarty, S Gupta, BP Chatterji, G Dhar, A Poddar, ...
Biochemistry 51 (36), 7138-7148, 2012
352012
Rational design and biophysical characterization of thioredoxin-based aptamers: insights into peptide grafting
CJ Brown, SG Dastidar, HY See, DW Coomber, M Ortiz-Lombardía, ...
Journal of molecular biology 395 (4), 871-883, 2010
342010
Cholesterol modulates membrane properties and the interaction of gp41 fusion peptide to promote membrane fusion
G Meher, S Sinha, GP Pattnaik, S Ghosh Dastidar, H Chakraborty
The Journal of Physical Chemistry B 123 (33), 7113-7122, 2019
332019
Molecular dynamics simulations of Aβ fibril interactions with β-sheet breaker peptides
NJ Bruce, D Chen, SG Dastidar, GE Marks, CH Schein, RA Bryce
Peptides 31 (11), 2100-2108, 2010
312010
Effect of structural parameters of peptides on dimer formation and highly oxidized side products in the oxidation of thiols of linear analogues of human β‐defensin 3 by DMSO
S Liu, L Zhou, L Chen, SG Dastidar, C Verma, J Li, D Tan, R Beuerman
Journal of peptide science: an official publication of the European Peptide …, 2009
302009
C-terminal substitution of MDM2 interacting peptides modulates binding affinity by distinctive mechanisms
CJ Brown, SG Dastidar, ST Quah, A Lim, B Chia, CS Verma
PLoS One 6 (8), e24122, 2011
282011
Anomalous behavior of water around sodium dodecyl sulphate micelles
SG Dastidar, C Mukhopadhyay
Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 70 (6 …, 2004
282004
Physical interaction between nuclear accumulated CC-NB-ARC-LRR protein and WRKY64 promotes EDS1 dependent Fusarium wilt resistance in chickpea
J Chakraborty, P Priya, SG Dastidar, S Das
Plant science 276, 111-133, 2018
232018
An evolutionary analysis identifies a conserved pentapeptide stretch containing the two essential lysine residues for rice L-myo-inositol 1-phosphate synthase …
P Basak, S Maitra-Majee, JK Das, A Mukherjee, S Ghosh Dastidar, ...
PloS one 12 (9), e0185351, 2017
232017
Unfolding dynamics of the protein ubiquitin: insight from simulation
SG Dastidar, C Mukhopadhyay
Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 72 (5 …, 2005
232005
Why is F19Ap53 unable to bind MDM2? Simulations suggest crack propagation modulates binding
SG Dastidar, DP Lane, CS Verma
Cell Cycle 11 (12), 2239-2247, 2012
212012
Role of protein flexibility in the discovery of new drugs
G Fuentes, SG Dastidar, A Madhumalar, CS Verma
Drug Development Research 72 (1), 26-35, 2011
212011
Forces mediating protein–protein interactions: a computational study of p53 “approaching” MDM2
SG Dastidar, A Madhumalar, G Fuentes, DP Lane, CS Verma
Theoretical Chemistry Accounts 125, 621-635, 2010
212010
Folding transition-state and denatured-state ensembles of FSD-1 from folding and unfolding simulations
H Lei, SG Dastidar, Y Duan
The Journal of Physical Chemistry B 110 (43), 22001-22008, 2006
212006
New insight to structure-function relationship of GalNAc mediated primary interaction between insecticidal Cry1Ac toxin and HaALP receptor of Helicoverpa armigera
A Sengupta, A Sarkar, P Priya, S Ghosh Dastidar, S Das
PloS one 8 (10), e78249, 2013
182013
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