| Tunicates and not cephalochordates are the closest living relatives of vertebrates F Delsuc, H Brinkmann, D Chourrout, H Philippe Nature 439 (7079), 965-968, 2006 | 1779 | 2006 |
| A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process N Lartillot, H Philippe Molecular biology and evolution 21 (6), 1095-1109, 2004 | 1575 | 2004 |
| Phylogenomics and the reconstruction of the tree of life F Delsuc, H Brinkmann, H Philippe Nature Reviews Genetics 6 (5), 361-375, 2005 | 1438 | 2005 |
| A simple and robust statistical test for detecting the presence of recombination TC Bruen, H Philippe, D Bryant Genetics 172 (4), 2665-2681, 2006 | 1408 | 2006 |
| Phylotranscriptomic analysis of the origin and early diversification of land plants NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ... Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014 | 1278 | 2014 |
| Resolving difficult phylogenetic questions: why more sequences are not enough H Philippe, H Brinkmann, DV Lavrov, DTJ Littlewood, M Manuel, ... PLoS biology 9 (3), e1000602, 2011 | 1141 | 2011 |
| Phylogenomics revives traditional views on deep animal relationships H Philippe, R Derelle, P Lopez, K Pick, C Borchiellini, N Boury-Esnault, ... Current Biology 19 (8), 706-712, 2009 | 787 | 2009 |
| The African coelacanth genome provides insights into tetrapod evolution CT Amemiya, J Alföldi, AP Lee, S Fan, H Philippe, I MacCallum, I Braasch, ... Nature 496 (7445), 311-316, 2013 | 761 | 2013 |
| Computing Bayes factors using thermodynamic integration N Lartillot, H Philippe Systematic biology 55 (2), 195-207, 2006 | 757 | 2006 |
| Phylogenomics: the beginning of incongruence? O Jeffroy, H Brinkmann, F Delsuc, H Philippe TRENDS in Genetics 22 (4), 225-231, 2006 | 738 | 2006 |
| The timing of eukaryotic evolution: does a relaxed molecular clock reconcile proteins and fossils? EJP Douzery, EA Snell, E Bapteste, F Delsuc, H Philippe Proceedings of the National Academy of Sciences 101 (43), 15386-15391, 2004 | 695 | 2004 |
| Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model N Lartillot, H Brinkmann, H Philippe BMC evolutionary biology 7, 1-14, 2007 | 680 | 2007 |
| MUST, a computer package of Management Utilities for Sequences and Trees H Philippe Nucleic Acids Research 21 (22), 5264-5272, 1993 | 655 | 1993 |
| Monophyly of primary photosynthetic eukaryotes: green plants, red algae, and glaucophytes N Rodríguez-Ezpeleta, H Brinkmann, SC Burey, B Roure, G Burger, ... Current biology 15 (14), 1325-1330, 2005 | 639 | 2005 |
| Multigene analyses of bilaterian animals corroborate the monophyly of Ecdysozoa, Lophotrochozoa, and Protostomia H Philippe, N Lartillot, H Brinkmann Molecular biology and evolution 22 (5), 1246-1253, 2005 | 606 | 2005 |
| Data access for the 1,000 Plants (1KP) project N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ... Gigascience 3 (1), 2047-217X-3-17, 2014 | 599 | 2014 |
| Innate immunity: Isolation of several cysteine-rich antimicrobial peptides from the blood of a mollusc, Mytilus edulis M Charlet, S Chernysh, H Philippe, C Hetru, JA Hoffmann, P Bulet Journal of Biological Chemistry 271 (36), 21808-21813, 1996 | 557 | 1996 |
| A general comparison of relaxed molecular clock models T Lepage, D Bryant, H Philippe, N Lartillot Molecular biology and evolution 24 (12), 2669-2680, 2007 | 551 | 2007 |
| A large and consistent phylogenomic dataset supports sponges as the sister group to all other animals P Simion, H Philippe, D Baurain, M Jager, DJ Richter, A Di Franco, ... Current biology 27 (7), 958-967, 2017 | 517 | 2017 |
| The origin of red algae and the evolution of chloroplasts D Moreira, H Le Guyader, H Philippe Nature 405 (6782), 69-72, 2000 | 514 | 2000 |
