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Bala Krishnamoorthy
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Development of a four-body statistical pseudo-potential to discriminate native from non-native protein conformations
B Krishnamoorthy, A Tropsha
Bioinformatics 19 (12), 1540-1548, 2003
1602003
Optimal homologous cycles, total unimodularity, and linear programming
TK Dey, AN Hirani, B Krishnamoorthy
Proceedings of the forty-second ACM symposium on Theory of computing, 221-230, 2010
1572010
Four-body scoring function for mutagenesis
C Deutsch, B Krishnamoorthy
Bioinformatics 23 (22), 3009-3015, 2007
602007
Column basis reduction and decomposable knapsack problems
B Krishnamoorthy, G Pataki
Discrete Optimization 6 (3), 242-270, 2009
442009
Continuous toolpath planning in a graphical framework for sparse infill additive manufacturing
P Gupta, B Krishnamoorthy, G Dreifus
Computer-Aided Design 127, 102880, 2020
402020
Scoring function to predict solubility mutagenesis
Y Tian, C Deutsch, B Krishnamoorthy
Algorithms for Molecular Biology 5, 1-11, 2010
332010
Bounds on the size of branch-and-bound proofs for integer knapsacks
B Krishnamoorthy
Operations Research Letters 36 (1), 19-25, 2008
282008
Neck muscle paths and moment arms are significantly affected by wrapping surface parameters
BL Suderman, B Krishnamoorthy, AN Vasavada
Computer methods in biomechanics and biomedical engineering 15 (7), 735-744, 2012
272012
Considerations for waste gasification as an alternative to landfilling in Washington state using decision analysis and optimization
P Behrend, B Krishnamoorthy
Sustainable Production and Consumption 12, 170-179, 2017
242017
Topological features in cancer gene expression data
S Lockwood, B Krishnamoorthy
Pacific Symposium on Biocomputing Co-Chairs, 108-119, 2014
212014
Neighborhood properties are important determinants of temperature sensitive mutations
S Lockwood, B Krishnamoorthy, P Ye
PloS one 6 (12), e28507, 2011
192011
Hyppo-X: A Scalable Exploratory Framework for Analyzing Complex Phenomics Data
M Kamruzzaman, A Kalyanaraman, B Krishnamoorthy, S Hey, P Schnable
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2019
18*2019
Representations of energy landscapes by sublevelset persistent homology: an example with n-alkanes
J Mirth, Y Zhai, J Bush, EG Alvarado, H Jordan, M Heim, ...
The Journal of Chemical Physics 154 (11), 2021
162021
A topological characterization of protein structure
B Krishnamoorthy, S Provan, A Tropsha
Data Mining in Biomedicine, 431-455, 2007
152007
Simplicial flat norm with scale
S Ibrahim, B Krishnamoorthy, KR Vixie
Journal of Computational Geometry 4 (1), 133-159, 2013
142013
Detecting divergent subpopulations in phenomics data using interesting flares
M Kamruzzaman, A Kalyanaraman, B Krishnamoorthy
Proceedings of the 2018 ACM International Conference on Bioinformatics …, 2018
132018
Interesting paths in the mapper complex
BK Ananth Kalyanaraman, Methun Kamruzzaman
Journal of computational Geometry 10 (1), 500-531, 2019
12*2019
Edge contractions and simplicial homology
TK Dey, AN Hirani, B Krishnamoorthy, G Smith
arXiv preprint arXiv:1304.0664, 2013
122013
Pheno-Mapper: an interactive toolbox for the visual exploration of phenomics data
Y Zhou, M Kamruzzaman, P Schnable, B Krishnamoorthy, ...
Proceedings of the 12th ACM International Conference on Bioinformatics …, 2021
112021
A Knapsack-Like Code Using Recurrence Sequence Representations
WW Nathan Hamlin, Bala Krishnamoorthy
Fibonacci Quarterly 53 (1), 24-33, 2015
112015
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