Aleksey V Zimin

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Steven SalzbergBloomberg Distinguished Professor, Johns Hopkins UniversityE-mail confirmado em jhu.edu
James YorkeDist. Univ. Research Prof of Math and Physics, Univ. of MarylandE-mail confirmado em umd.edu
Daniela PuiuJohns Hopkins UniversityE-mail confirmado em jhu.edu
Guillaume MarçaisSystem ScientistE-mail confirmado em cs.cmu.edu
Brian R HuntUniversity of MarylandE-mail confirmado em umd.edu
Edward OttUniversity of MarylandE-mail confirmado em umd.edu
David NealeUniversity California, Davis USDAE-mail confirmado em ucdavis.edu
Geo PerteaData/Software Engineer, Lieber Institute for Brain DevelopmentE-mail confirmado em jhu.edu
Mihaela PerteaAssociate Professor, Johns Hopkins UniversityE-mail confirmado em jhu.edu
Eugenia KalnayDistinguished University Professor, University of MarylandE-mail confirmado em umd.edu
Jill WegrzynAssociate Professor in Ecology and Evolutionary Biology and Computational Biology Core DirectorE-mail confirmado em uconn.edu
Eric KostelichPresident's Professor of Mathematics, Arizona State UniversityE-mail confirmado em asu.edu
Charles H. LangleyProfessor, University of California - DavisE-mail confirmado em ucdavis.edu
Marc CrepeauE-mail confirmado em ucdavis.edu
Kristian A. StevensDepartments of Computer Science and Evolution and Ecology, UC DavisE-mail confirmado em ucdavis.edu
Winston TimpAssociate Professor, Johns Hopkins UniversityE-mail confirmado em jhu.edu
Adam M. PhillippyDirector, Center for Genomics and Data Science Research, NHGRI, NIHE-mail confirmado em nih.gov
Michael C. SchatzBloomberg Distinguished Professor, Johns Hopkins UniversityE-mail confirmado em cs.jhu.edu
Matteo CorazzaENEAE-mail confirmado em enea.it
Pieter de JongCHORIE-mail confirmado em chori.org

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Aleksey V Zimin

Research Scientist, Department of Biomedical Engineering, Johns Hopkins Unviersity

E-mail confirmado em jhu.edu - Página inicial

bioinformatics genome assembly annotation alignment gene finding


Título Ordenar por citações Ordenar por ano Ordenar por título	Citado por Citado por	Ano
Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-18, 2007	2313	2007
MUMmer4: A fast and versatile genome alignment system G Marçais, AL Delcher, AM Phillippy, R Coston, SL Salzberg, A Zimin PLoS computational biology 14 (1), e1005944, 2018	1849	2018
The MaSuRCA genome assembler AV Zimin, G Marçais, D Puiu, M Roberts, SL Salzberg, JA Yorke Bioinformatics 29 (21), 2669-2677, 2013	1495	2013
Transcriptome assembly from long-read RNA-seq alignments with StringTie2 S Kovaka, AV Zimin, GM Pertea, R Razaghi, SL Salzberg, M Pertea Genome biology 20, 1-13, 2019	1410	2019
A whole-genome assembly of the domestic cow, Bos taurus AV Zimin, AL Delcher, L Florea, DR Kelley, MC Schatz, D Puiu, ... Genome biology 10, 1-10, 2009	1380	2009
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species Nature 487 (7405), 94-98, 2012	1253	2012
A local ensemble Kalman filter for atmospheric data assimilation E Ott, BR Hunt, I Szunyogh, AV Zimin, EJ Kostelich, M Corazza, E Kalnay, ... Tellus A: Dynamic Meteorology and Oceanography 56 (5), 415-428, 2004	1078	2004
The Atlantic salmon genome provides insights into rediploidization S Lien, BF Koop, SR Sandve, JR Miller, MP Kent, T Nome, TR Hvidsten, ... Nature 533 (7602), 200-205, 2016	1073	2016
GAGE: A critical evaluation of genome assemblies and assembly algorithms SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ... Genome research 22 (3), 557-567, 2012	902	2012
A draft human pangenome reference WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ... Nature 617 (7960), 312-324, 2023	662	2023
Genome sequence of the progenitor of the wheat D genome Aegilops tauschii MC Luo, YQ Gu, D Puiu, H Wang, SO Twardziok, KR Deal, N Huo, T Zhu, ... Nature 551 (7681), 498-502, 2017	617	2017
Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies DB Neale, JL Wegrzyn, KA Stevens, AV Zimin, D Puiu, MW Crepeau, ... Genome biology 15, 1-13, 2014	563	2014
De novo assembly of the cattle reference genome with single-molecule sequencing BD Rosen, DM Bickhart, RD Schnabel, S Koren, CG Elsik, E Tseng, ... Gigascience 9 (3), giaa021, 2020	533	2020
Multi-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis RA Dalloul, JA Long, AV Zimin, L Aslam, K Beal, L Ann Blomberg, ... PLoS biology 8 (9), e1000475, 2010	475	2010
Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm AV Zimin, D Puiu, MC Luo, T Zhu, S Koren, G Marçais, JA Yorke, J Dvořák, ... Genome research 27 (5), 787-792, 2017	439	2017
Sequencing and assembly of the 22-Gb loblolly pine genome A Zimin, KA Stevens, MW Crepeau, A Holtz-Morris, M Koriabine, ... Genetics 196 (3), 875-890, 2014	396	2014
The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts Z Liu, S Liu, J Yao, L Bao, J Zhang, Y Li, C Jiang, L Sun, R Wang, ... Nature communications 7 (1), 11757, 2016	356	2016
Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile) CD Smith, A Zimin, C Holt, E Abouheif, R Benton, E Cash, V Croset, ... Proceedings of the National Academy of Sciences 108 (14), 5673-5678, 2011	338	2011
The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum AV Zimin, D Puiu, R Hall, S Kingan, BJ Clavijo, SL Salzberg Gigascience 6 (11), gix097, 2017	310	2017
Draft genome of the red harvester ant Pogonomyrmex barbatus CR Smith, CD Smith, HM Robertson, M Helmkampf, A Zimin, M Yandell, ... Proceedings of the National Academy of Sciences 108 (14), 5667-5672, 2011	307	2011

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