| Regulatory divergence in Drosophila revealed by mRNA-seq CJ McManus, JD Coolon, MO Duff, J Eipper-Mains, BR Graveley, ... Genome research 20 (6), 816-825, 2010 | 452 | 2010 |
| Tempo and mode of regulatory evolution in Drosophila JD Coolon, CJ McManus, KR Stevenson, BR Graveley, PJ Wittkopp Genome research 24 (5), 797-808, 2014 | 194 | 2014 |
| Sources of bias in measures of allele-specific expression derived from RNA-seq data aligned to a single reference genome KR Stevenson, JD Coolon, PJ Wittkopp BMC genomics 14, 1-13, 2013 | 172 | 2013 |
| Caenorhabditis elegans genomic response to soil bacteria predicts environment-specific genetic effects on life history traits JD Coolon, KL Jones, TC Todd, BC Carr, MA Herman PLoS genetics 5 (6), e1000503, 2009 | 139 | 2009 |
| Long-Term Nitrogen Amendment Alters the Diversity and Assemblage of Soil Bacterial Communities in Tallgrass Prairie JD Coolon, KL Jones, TC Todd, JM Blair, MA Herman PloS one 8 (6), e67884, 2013 | 134 | 2013 |
| The roles of cis-and trans-regulation in the evolution of regulatory incompatibilities and sexually dimorphic gene expression CD Meiklejohn, JD Coolon, DL Hartl, PJ Wittkopp Genome research 24 (1), 84-95, 2014 | 100 | 2014 |
| Evolutionary dynamics of regulatory changes underlying gene expression divergence among Saccharomyces species BPH Metzger, PJ Wittkopp, J Coolon Genome Biology and Evolution 9 (4), 843-854, 2017 | 87 | 2017 |
| Genomic imprinting absent in Drosophila melanogaster adult females JD Coolon, KR Stevenson, CJ McManus, BR Graveley, PJ Wittkopp Cell reports 2 (1), 69-75, 2012 | 54 | 2012 |
| Genetic basis of octanoic acid resistance in Drosophila sechellia: functional analysis of a fine‐mapped region JM Andrade López, SM Lanno, JM Auerbach, EC Moskowitz, LA Sligar, ... Molecular Ecology 26 (4), 1148-1160, 2017 | 48 | 2017 |
| Molecular mechanisms and evolutionary processes contributing to accelerated divergence of gene expression on the Drosophila X chromosome JD Coolon, KR Stevenson, CJ McManus, B Yang, BR Graveley, ... Molecular biology and evolution 32 (10), 2605-2615, 2015 | 43 | 2015 |
| Evolution of splicing regulatory networks in Drosophila CJ McManus, JD Coolon, J Eipper-Mains, PJ Wittkopp, BR Graveley Genome research 24 (5), 786-796, 2014 | 43 | 2014 |
| Molecular approach for assessing responses of microbial‐feeding nematodes to burning and chronic nitrogen enrichment in a native grassland KL Jones, TC Todd, JL WALL‐BEAM, JD Coolon, JM Blair, MA Herman Molecular Ecology 15 (9), 2601-2609, 2006 | 36 | 2006 |
| Microbial ecological response of the intestinal flora of Peromyscus maniculatus and P. leucopus to heavy metal contamination JD Coolon, KL Jones, S Narayanan, SM Wisely Molecular Ecology 19, 67-80, 2010 | 29 | 2010 |
| Transcriptomic Analysis of Octanoic Acid Response in Drosophila sechellia Using RNA-Sequencing SM Lanno, SM Gregory, SJ Shimshak, MK Alverson, K Chiu, AL Feil, ... G3: Genes, Genomes, Genetics 7 (12), 3867-3873, 2017 | 26 | 2017 |
| Investigating the role of Osiris genes in Drosophila sechellia larval resistance to a host plant toxin SM Lanno, SJ Shimshak, RD Peyser, SC Linde, JD Coolon Ecology and Evolution 9 (4), 1922-1933, 2019 | 25 | 2019 |
| Analysis of cytochrome P450 contribution to evolved plant toxin resistance in Drosophila sechellia RD Peyser, SM Lanno, SJ Shimshak, JD Coolon Insect Molecular Biology 26 (6), 715-720, 2017 | 21 | 2017 |
| Sex-specific effects of cis-regulatory variants in Drosophila melanogaster JD Coolon, W Webb, PJ Wittkopp Genetics 195 (4), 1419-1422, 2013 | 18 | 2013 |
| Genome‐wide effect of tetracycline, doxycycline and 4‐epidoxycycline on gene expression in Saccharomyces cerevisiae G Sanchez, SC Linde, JD Coolon Yeast 37 (7-8), 389-396, 2020 | 15 | 2020 |
| 3 cis-and trans-Regulation in Drosophila Interspecific Hybrids JD Coolon, PJ Wittkopp Polyploid and Hybrid Genomics, 37, 2013 | 12 | 2013 |
| Mask, a component of the Hippo pathway, is required for Drosophila eye morphogenesis MW DeAngelis, EW McGhie, JD Coolon, RI Johnson Developmental Biology 464 (1), 53-70, 2020 | 11 | 2020 |
