| A global reference for human genetic variation 1000 Genomes Project Consortium Nature 526 (7571), 68, 2015 | 16619 | 2015 |
| An integrated map of genetic variation from 1,092 human genomes 1000 Genomes Project Consortium Nature 491 (7422), 56, 2012 | 8500 | 2012 |
| Comprehensive molecular characterization of clear cell renal cell carcinoma Cancer Genome Atlas Research Network Analysis working group: Baylor College ... Nature 499 (7456), 43-49, 2013 | 3860* | 2013 |
| The molecular taxonomy of primary prostate cancer A Abeshouse, J Ahn, R Akbani, A Ally, S Amin, CD Andry, M Annala, ... Cell 163 (4), 1011-1025, 2015 | 2839 | 2015 |
| Architecture of the human regulatory network derived from ENCODE data MB Gerstein, A Kundaje, M Hariharan, SG Landt, KK Yan, C Cheng, ... Nature 489 (7414), 91-100, 2012 | 1725 | 2012 |
| Role of non-coding sequence variants in cancer E Khurana, Y Fu, D Chakravarty, F Demichelis, MA Rubin, M Gerstein Nature Reviews Genetics 17 (2), 93-108, 2016 | 554 | 2016 |
| Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel O Delaneau, J Marchini Nature communications 5 (1), 3934, 2014 | 477 | 2014 |
| Integrative annotation of variants from 1092 humans: application to cancer genomics E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, ... Science 342 (6154), 1235587, 2013 | 421 | 2013 |
| FunSeq2: a framework for prioritizing noncoding regulatory variants in cancer Y Fu, Z Liu, S Lou, J Bedford, XJ Mu, KY Yip, E Khurana, M Gerstein Genome biology 15, 1-15, 2014 | 386 | 2014 |
| Interpretation of genomic variants using a unified biological network approach E Khurana, Y Fu, J Chen, M Gerstein PLoS computational biology 9 (3), e1002886, 2013 | 198 | 2013 |
| LARVA: an integrative framework for large-scale analysis of recurrent variants in noncoding annotations L Lochovsky, J Zhang, Y Fu, E Khurana, M Gerstein Nucleic acids research 43 (17), 8123-8134, 2015 | 91 | 2015 |
| Using ALoFT to determine the impact of putative loss-of-function variants in protein-coding genes S Balasubramanian, Y Fu, M Pawashe, P McGillivray, M Jin, J Liu, ... Nature communications 8 (1), 1-11, 2017 | 56 | 2017 |
| Simultaneous dimension reduction and adjustment for confounding variation Z Lin, C Yang, Y Zhu, J Duchi, Y Fu, Y Wang, B Jiang, M Zamanighomi, ... Proceedings of the National Academy of Sciences 113 (51), 14662-14667, 2016 | 54 | 2016 |
| Design and implementation of the international genetics and translational research in transplantation network BJ Keating, J Van Setten, PA Jacobson, MV Holmes, SS Verma, ... Transplantation 99 (11), 2401-2412, 2015 | 40 | 2015 |
| ecTMB: a robust method to estimate and classify tumor mutational burden L Yao, Y Fu, M Mohiyuddin, HYK Lam Scientific reports 10 (1), 4983, 2020 | 21 | 2020 |
| An iterative network partition algorithm for accurate identification of dense network modules S Sun, X Dong, Y Fu, W Tian Nucleic Acids Research 40 (3), e18-e18, 2012 | 18 | 2012 |
| Using FunSeq2 for Coding and Non‐Coding Variant Annotation and Prioritization P Dhingra, Y Fu, M Gerstein, E Khurana Current Protocols in Bioinformatics 57 (1), 15.11. 1-15.11. 17, 2017 | 10 | 2017 |
| Lessons from the CAGI‐4 Hopkins clinical panel challenge JM Chandonia, A Adhikari, M Carraro, A Chhibber, GR Cutting, Y Fu, ... Human mutation 38 (9), 1155-1168, 2017 | 9 | 2017 |
| Identification of yeast cell cycle regulated genes based on genomic features C Cheng, Y Fu, L Shen, M Gerstein BMC systems biology 7, 1-13, 2013 | 9 | 2013 |
| Analyzing the effects of pretreatment diversity on HCV drug treatment responsiveness using Bayesian partition methods Y Fu, G Chen, X Guo, J Zhang, Y Pan Journal of bioinformatics and proteomics review 1 (1), 1, 2015 | 4 | 2015 |
