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Brian Munsky
Tytuł
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The finite state projection algorithm for the solution of the chemical master equation
B Munsky, M Khammash
The Journal of chemical physics 124 (4), 2006
9452006
Using gene expression noise to understand gene regulation
B Munsky, G Neuert, A Van Oudenaarden
Science 336 (6078), 183-187, 2012
8762012
Ribozyme-based insulator parts buffer synthetic circuits from genetic context
C Lou, B Stanton, YJ Chen, B Munsky, CA Voigt
Nature biotechnology 30 (11), 1137-1142, 2012
4562012
Systematic identification of signal-activated stochastic gene regulation
G Neuert, B Munsky, RZ Tan, L Teytelman, M Khammash, ...
Science 339 (6119), 584-587, 2013
3242013
Transcription factors modulate c-Fos transcriptional bursts
A Senecal, B Munsky, F Proux, N Ly, FE Braye, C Zimmer, F Mueller, ...
Cell reports 8 (1), 75-83, 2014
3202014
Listening to the noise: random fluctuations reveal gene network parameters
B Munsky, B Trinh, M Khammash
Molecular systems biology 5 (1), 318, 2009
2622009
Reduction and solution of the chemical master equation using time scale separation and finite state projection
S Peleš, B Munsky, M Khammash
The Journal of chemical physics 125 (20), 2006
1642006
The simplicity of completion time distributions for common complex biochemical processes
G Bel, B Munsky, I Nemenman
Physical biology 7 (1), 016003, 2009
1202009
Machine learning to predict microbial community functions: an analysis of dissolved organic carbon from litter decomposition
J Thompson, R Johansen, J Dunbar, B Munsky
PLoS One 14 (7), e0215502, 2019
1092019
A multiple time interval finite state projection algorithm for the solution to the chemical master equation
B Munsky, M Khammash
Journal of Computational Physics 226 (1), 818-835, 2007
992007
Integrating single-molecule experiments and discrete stochastic models to understand heterogeneous gene transcription dynamics
B Munsky, Z Fox, G Neuert
Methods 85, 12-21, 2015
982015
Distribution shapes govern the discovery of predictive models for gene regulation
B Munsky, G Li, ZR Fox, DP Shepherd, G Neuert
Proceedings of the National Academy of Sciences 115 (29), 7533-7538, 2018
952018
The finite state projection approach for the analysis of stochastic noise in gene networks
B Munsky, M Khammash
IEEE Transactions on Automatic Control 53 (Special Issue), 201-214, 2008
842008
Quantifying the dynamics of IRES and cap translation with single-molecule resolution in live cells
A Koch, L Aguilera, T Morisaki, B Munsky, TJ Stasevich
Nature Structural & Molecular Biology 27 (12), 1209-1210, 2020
602020
Induced-shear piezoelectric actuators for rotor blade trailing edge flaps
LR Centolanza, EC Smith, B Munsky
Smart Materials and Structures 11 (1), 24, 2002
602002
Live-cell single RNA imaging reveals bursts of translational frameshifting
K Lyon, LU Aguilera, T Morisaki, B Munsky, TJ Stasevich
Molecular Cell 75 (1), 172-183. e9, 2019
552019
Identification from stochastic cell-to-cell variation: a genetic switch case study
B Munsky, M Khammash
IET systems biology 4 (6), 356-366, 2010
492010
Live-cell imaging reveals the spatiotemporal organization of endogenous RNA polymerase II phosphorylation at a single gene
LS Forero-Quintero, W Raymond, T Handa, MN Saxton, T Morisaki, ...
Nature Communications 12 (1), 3158, 2021
462021
Finite state projection based bounds to compare chemical master equation models using single-cell data
Z Fox, G Neuert, B Munsky
The Journal of chemical physics 145 (7), 2016
452016
Counting small RNA in pathogenic bacteria
DP Shepherd, N Li, SN Micheva-Viteva, B Munsky, E Hong-Geller, ...
Analytical chemistry 85 (10), 4938-4943, 2013
432013
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